STRINGSTRING
PTSG_00839 PTSG_00839 PTSG_02048 PTSG_02048 PTSG_02905 PTSG_02905 PTSG_04111 PTSG_04111 PTSG_05210 PTSG_05210 PTSG_05847 PTSG_05847 PTSG_07138 PTSG_07138 PTSG_08157 PTSG_08157 PTSG_08487 PTSG_08487 PTSG_09135 PTSG_09135
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00839Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (671 aa)
PTSG_02048Acaa1a protein; Belongs to the thiolase-like superfamily. Thiolase family. (405 aa)
PTSG_02905Acyl-CoA hydrolase. (536 aa)
PTSG_04111Uncharacterized protein. (308 aa)
PTSG_05210Elongation of fatty acids protein. (285 aa)
PTSG_05847Elongation of fatty acids protein. (281 aa)
PTSG_07138Uncharacterized protein. (363 aa)
PTSG_08157Delta-12 fatty acid desaturase. (380 aa)
PTSG_08487Elongation of fatty acids protein. (277 aa)
PTSG_09135Estradiol 17-beta-dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (246 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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