STRINGSTRING
PTSG_00314 PTSG_00314 PTSG_00415 PTSG_00415 PTSG_00527 PTSG_00527 PTSG_00559 PTSG_00559 PTSG_00898 PTSG_00898 PTSG_00909 PTSG_00909 PTSG_00983 PTSG_00983 PTSG_01673 PTSG_01673 PTSG_01785 PTSG_01785 PTSG_01917 PTSG_01917 PTSG_01926 PTSG_01926 PTSG_01946 PTSG_01946 PTSG_02034 PTSG_02034 PTSG_01466 PTSG_01466 PTSG_01177 PTSG_01177 PTSG_03052 PTSG_03052 PTSG_03185 PTSG_03185 PTSG_03192 PTSG_03192 PTSG_03211 PTSG_03211 PTSG_11989 PTSG_11989 PTSG_03292 PTSG_03292 PTSG_03331 PTSG_03331 PTSG_03333 PTSG_03333 PTSG_03467 PTSG_03467 PTSG_03785 PTSG_03785 PTSG_03489 PTSG_03489 PTSG_03511 PTSG_03511 PTSG_03615 PTSG_03615 PTSG_03712 PTSG_03712 PTSG_03738 PTSG_03738 PTSG_04001 PTSG_04001 PTSG_04540 PTSG_04540 PTSG_04612 PTSG_04612 PTSG_04656 PTSG_04656 PTSG_04684 PTSG_04684 PTSG_04428 PTSG_04428 PTSG_04876 PTSG_04876 PTSG_04968 PTSG_04968 PTSG_04729 PTSG_04729 PTSG_12213 PTSG_12213 PTSG_05728 PTSG_05728 PTSG_06324 PTSG_06324 PTSG_05907 PTSG_05907 PTSG_06701 PTSG_06701 PTSG_06722 PTSG_06722 PTSG_06499 PTSG_06499 PTSG_06512 PTSG_06512 PTSG_07573 PTSG_07573 PTSG_07597 PTSG_07597 EIF6 EIF6 PTSG_08053 PTSG_08053 PTSG_07506 PTSG_07506 PTSG_08905 PTSG_08905 PTSG_09399 PTSG_09399 PTSG_09438 PTSG_09438 PTSG_13095 PTSG_13095 PTSG_10839 PTSG_10839 PTSG_11309 PTSG_11309 PTSG_11350 PTSG_11350
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00314Exonuclease domain-containing protein. (1025 aa)
PTSG_00415U3 small nucleolar ribonucleoprotein IMP3. (178 aa)
PTSG_00527Uncharacterized protein. (378 aa)
PTSG_00559Mdn1 protein. (6667 aa)
PTSG_00898U3 small nucleolar ribonucleoprotein IMP4. (283 aa)
PTSG_00909WD_REPEATS_REGION domain-containing protein. (898 aa)
PTSG_00983VWFA domain-containing protein. (5721 aa)
PTSG_01673Uncharacterized protein. (379 aa)
PTSG_01785WD_REPEATS_REGION domain-containing protein. (498 aa)
PTSG_01917Uncharacterized protein. (739 aa)
PTSG_01926Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (168 aa)
PTSG_01946Uncharacterized protein. (628 aa)
PTSG_02034CP-type G domain-containing protein. (495 aa)
PTSG_01466Uncharacterized protein. (1170 aa)
PTSG_01177rRNA 2'-O-methyltransferase fibrillarin. (323 aa)
PTSG_03052C2f protein. (235 aa)
PTSG_0318560S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (463 aa)
PTSG_03192WD_REPEATS_REGION domain-containing protein. (898 aa)
PTSG_03211Uncharacterized protein. (803 aa)
PTSG_11989Tr-type G domain-containing protein. (1145 aa)
PTSG_03292Atypical/RIO/RIO1 protein kinase. (713 aa)
PTSG_03331GTP binding protein 4; Belongs to the sterol desaturase family. (635 aa)
PTSG_03333Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (679 aa)
PTSG_03467Uncharacterized protein. (536 aa)
PTSG_03785ATPase AFG2 protein. (852 aa)
PTSG_03489Centromere/microtubule-binding protein cbf5. (495 aa)
PTSG_03511Uncharacterized protein. (632 aa)
PTSG_03615Uncharacterized protein. (649 aa)
PTSG_03712Uncharacterized protein. (1339 aa)
PTSG_03738H/ACA ribonucleoprotein complex subunit 3. (64 aa)
PTSG_04001CMGC/CK2 protein kinase; Belongs to the protein kinase superfamily. (354 aa)
PTSG_04540Uncharacterized protein. (382 aa)
PTSG_04612Uncharacterized protein. (1110 aa)
PTSG_04656Oligoribonuclease. (238 aa)
PTSG_04684Atypical/RIO/RIO2 protein kinase. (590 aa)
PTSG_04428Nuclear export factor CRM1. (1083 aa)
PTSG_04876Uncharacterized protein. (348 aa)
PTSG_04968WD_REPEATS_REGION domain-containing protein. (565 aa)
PTSG_04729BP28CT domain-containing protein. (2435 aa)
PTSG_12213Uncharacterized protein. (1010 aa)
PTSG_05728Nucleolar protein 5A. (518 aa)
PTSG_06324Serine/Threonine protein kinase. (801 aa)
PTSG_05907N-acetyltransferase domain-containing protein. (746 aa)
PTSG_06701Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (718 aa)
PTSG_067225'-3' exoribonuclease 1. (1402 aa)
PTSG_06499GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (222 aa)
PTSG_06512PINc domain-containing protein. (206 aa)
PTSG_07573H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (207 aa)
PTSG_07597Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (237 aa)
PTSG_08053Uncharacterized protein. (1011 aa)
PTSG_07506Ribonuclease P protein subunit p20; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. Also a component of the MRP ribonuclease complex, which cleaves pre-rRNA sequences. (131 aa)
PTSG_08905Nucleolar protein 5. (516 aa)
PTSG_09399Uncharacterized protein; Belongs to the AAA ATPase family. (864 aa)
PTSG_09438Uncharacterized protein. (521 aa)
PTSG_13095Utp12 domain-containing protein. (705 aa)
PTSG_10839WD_REPEATS_REGION domain-containing protein. (1090 aa)
PTSG_11309Bms1-type G domain-containing protein. (1064 aa)
PTSG_11350Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (229 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.