STRINGSTRING
PTSG_00171 PTSG_00171 PTSG_00231 PTSG_00231 PTSG_00257 PTSG_00257 PTSG_00373 PTSG_00373 PTSG_00513 PTSG_00513 PTSG_00568 PTSG_00568 PTSG_00734 PTSG_00734 PTSG_00943 PTSG_00943 PTSG_00992 PTSG_00992 PTSG_01640 PTSG_01640 PTSG_01801 PTSG_01801 PTSG_01934 PTSG_01934 PTSG_01269 PTSG_01269 PTSG_01506 PTSG_01506 PTSG_01531 PTSG_01531 PTSG_02804 PTSG_02804 PTSG_03248 PTSG_03248 PTSG_11997 PTSG_11997 PTSG_03416 PTSG_03416 PTSG_03437 PTSG_03437 PTSG_03838 PTSG_03838 PTSG_03615 PTSG_03615 PTSG_04079 PTSG_04079 PTSG_04097 PTSG_04097 PTSG_04133 PTSG_04133 PTSG_04166 PTSG_04166 PTSG_04168 PTSG_04168 PTSG_04391 PTSG_04391 PTSG_04759 PTSG_04759 PTSG_04833 PTSG_04833 PTSG_04836 PTSG_04836 PTSG_05149 PTSG_05149 PTSG_05232 PTSG_05232 PTSG_06227 PTSG_06227 PTSG_06778 PTSG_06778 PTSG_06936 PTSG_06936 PTSG_06508 PTSG_06508 PTSG_06559 PTSG_06559 PTSG_07771 PTSG_07771 PTSG_07964 PTSG_07964 PTSG_08065 PTSG_08065 PTSG_08110 PTSG_08110 PTSG_07420 PTSG_07420 PTSG_07435 PTSG_07435 PTSG_08350 PTSG_08350 PTSG_08662 PTSG_08662 PTSG_08901 PTSG_08901 PTSG_08910 PTSG_08910 PTSG_09429 PTSG_09429 PTSG_10070 PTSG_10070 PTSG_10752 PTSG_10752 PTSG_10902 PTSG_10902 PTSG_10929 PTSG_10929 PTSG_11088 PTSG_11088 PTSG_11272 PTSG_11272 PTSG_11302 PTSG_11302 PTSG_11520 PTSG_11520
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00171Cleavage and polyadenylation specificity factor subunit 3. (790 aa)
PTSG_00231RNA polymerase II subunit A domain phosphatase SSU72. (275 aa)
PTSG_00257Mago nashi domain-containing protein. (149 aa)
PTSG_00373Pinin_SDK_memA domain-containing protein. (300 aa)
PTSG_00513Phosphatase 2A regulatory subunit A beta isoform. (596 aa)
PTSG_00568ATP-dependent RNA helicase eIF4A. (547 aa)
PTSG_00734RRM domain-containing protein. (355 aa)
PTSG_00943Polyadenylate binding protein. (765 aa)
PTSG_00992Polyadenylate binding protein. (642 aa)
PTSG_01640eIF4AIII-PA; Belongs to the DEAD box helicase family. (366 aa)
PTSG_01801PWI domain-containing protein. (536 aa)
PTSG_01934Phosphatase 2A regulatory subunit B family B56 beta isoform. (298 aa)
PTSG_01269mRNA cap 0 methyltransferase domain-containing protein. (439 aa)
PTSG_01506T-cell receptor beta chain ANA 11. (640 aa)
PTSG_01531Uncharacterized protein. (1084 aa)
PTSG_02804Cleavage and polyadenylation specificity factor subunit 2. (630 aa)
PTSG_03248Uncharacterized protein. (840 aa)
PTSG_11997mRNA 3'-end-processing protein yth1. (398 aa)
PTSG_03416Uncharacterized protein. (305 aa)
PTSG_03437CSTF1_dimer domain-containing protein. (416 aa)
PTSG_03838RRM domain-containing protein. (245 aa)
PTSG_03615Uncharacterized protein. (649 aa)
PTSG_04079Serine/threonine-protein phosphatase. (305 aa)
PTSG_04097RRM domain-containing protein. (281 aa)
PTSG_04133Uncharacterized protein. (423 aa)
PTSG_04166Fip1 domain-containing protein. (491 aa)
PTSG_04168WD_REPEATS_REGION domain-containing protein. (315 aa)
PTSG_04391Serine/threonine-protein phosphatase. (306 aa)
PTSG_04759Histone deacetylase complex subunit. (320 aa)
PTSG_04833SAP domain-containing protein. (484 aa)
PTSG_04836Serine/threonine-protein phosphatase. (315 aa)
PTSG_05149RRM domain-containing protein. (242 aa)
PTSG_05232Eukaryotic peptide chain release factor subunit. (434 aa)
PTSG_06227Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (4245 aa)
PTSG_06778WD_REPEATS_REGION domain-containing protein. (504 aa)
PTSG_06936Uncharacterized protein. (581 aa)
PTSG_06508Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (310 aa)
PTSG_06559Poly(A)-binding protein. (1688 aa)
PTSG_07771Eukaryotic polypeptide chain release factor 3. (661 aa)
PTSG_07964Uncharacterized protein. (1204 aa)
PTSG_08065Suf domain-containing protein. (410 aa)
PTSG_08110RRM domain-containing protein. (508 aa)
PTSG_07420RNA binding protein. (386 aa)
PTSG_07435Uncharacterized protein. (775 aa)
PTSG_08350RRM domain-containing protein. (397 aa)
PTSG_08662Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (203 aa)
PTSG_08901CPSF_A domain-containing protein. (1506 aa)
PTSG_08910Elongation factor-1alpha. (658 aa)
PTSG_09429Uncharacterized protein. (543 aa)
PTSG_10070Mago-bind domain-containing protein. (149 aa)
PTSG_10752RRM domain-containing protein. (328 aa)
PTSG_10902RNA-binding protein 8A. (144 aa)
PTSG_10929Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family. (445 aa)
PTSG_11088Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (409 aa)
PTSG_11272RNA-binding protein Musashi-1. (1023 aa)
PTSG_11302Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (318 aa)
PTSG_11520SER_THR_PHOSPHATASE domain-containing protein. (248 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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