STRINGSTRING
PTSG_00131 PTSG_00131 PTSG_00267 PTSG_00267 PTSG_11588 PTSG_11588 PTSG_11661 PTSG_11661 PTSG_01666 PTSG_01666 PTSG_01682 PTSG_01682 MCM7 MCM7 PTSG_01490 PTSG_01490 PTSG_01195 PTSG_01195 PTSG_02360 PTSG_02360 PTSG_11980 PTSG_11980 PTSG_04236 PTSG_04236 PTSG_03969 PTSG_03969 PTSG_04052 PTSG_04052 PTSG_04564 PTSG_04564 PTSG_04316 PTSG_04316 PTSG_04424 PTSG_04424 PTSG_05321 PTSG_05321 PTSG_05322 PTSG_05322 PTSG_12257 PTSG_12257 PTSG_05144 PTSG_05144 PTSG_05196 PTSG_05196 PTSG_06200 PTSG_06200 PTSG_05820 PTSG_05820 PTSG_07071 PTSG_07071 PTSG_07151 PTSG_07151 PTSG_12543 PTSG_12543 PTSG_06710 PTSG_06710 PTSG_06939 PTSG_06939 PTSG_06614 PTSG_06614 FEN1 FEN1 PTSG_07379 PTSG_07379 PTSG_09623 PTSG_09623 PTSG_09417 PTSG_09417
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PTSG_00131DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (564 aa)
PTSG_00267Uncharacterized protein. (295 aa)
PTSG_11588DNA helicase; Belongs to the MCM family. (813 aa)
PTSG_11661DNA ligase. (1437 aa)
PTSG_01666Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (264 aa)
PTSG_01682Uncharacterized protein. (456 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (725 aa)
PTSG_01490RPA_C domain-containing protein. (294 aa)
PTSG_01195Minichromosomal maintenance factor; Belongs to the MCM family. (858 aa)
PTSG_02360DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (651 aa)
PTSG_11980Uncharacterized protein. (506 aa)
PTSG_04236DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2107 aa)
PTSG_03969Replication factor C subunit 1. (1046 aa)
PTSG_04052DNA ligase. (1207 aa)
PTSG_04564DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (522 aa)
PTSG_04316DNA helicase; Belongs to the MCM family. (862 aa)
PTSG_04424Replication factor C subunit 2. (324 aa)
PTSG_05321Uncharacterized protein. (135 aa)
PTSG_05322Uncharacterized protein. (158 aa)
PTSG_12257DNA primase; Belongs to the eukaryotic-type primase small subunit family. (369 aa)
PTSG_05144DNA ligase. (664 aa)
PTSG_05196Uncharacterized protein. (1412 aa)
PTSG_06200DNA polymerase. (1139 aa)
PTSG_05820CBFD_NFYB_HMF domain-containing protein. (180 aa)
PTSG_07071DNA helicase; Belongs to the MCM family. (705 aa)
PTSG_07151Replication factor C subunit 3. (353 aa)
PTSG_12543DNA helicase; Belongs to the MCM family. (1619 aa)
PTSG_06710Uncharacterized protein. (585 aa)
PTSG_06939Replication factor C subunit 5. (330 aa)
PTSG_06614Replication factor C 4. (345 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
PTSG_07379Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (421 aa)
PTSG_09623Polymerase. (191 aa)
PTSG_09417DNA polymerase. (1535 aa)
Your Current Organism:
Salpingoeca rosetta
NCBI taxonomy Id: 946362
Other names: Proterospongia sp. ATCC 50818, S. rosetta, Salpingoeca rosetta ATCC 50818, Salpingoeca rosetta ATCC50818, Salpingoeca rosetta Dayel et al. 2011, Salpingoeca sp. ATCC 50818, Salpingoeca sp. ATCC50818
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