STRINGSTRING
BESB_023000 BESB_023000 BESB_033140 BESB_033140 FEN1 FEN1 BESB_016250 BESB_016250 BESB_056390 BESB_056390 BESB_043770 BESB_043770 BESB_065960 BESB_065960 BESB_036270 BESB_036270 BESB_054240 BESB_054240 BESB_047150 BESB_047150 BESB_007690 BESB_007690
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BESB_023000DNA ligase. (1026 aa)
BESB_033140Putative DNA ligase (NAD+). (1699 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (539 aa)
BESB_016250Putative replication factor C subunit 4. (350 aa)
BESB_056390Uncharacterized protein. (313 aa)
BESB_043770Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (287 aa)
BESB_065960Uncharacterized protein. (1811 aa)
BESB_036270Putative replication factor C subunit 2. (357 aa)
BESB_054240Replication factor C subunit 1. (1247 aa)
BESB_047150AAA domain-containing protein. (739 aa)
BESB_007690Putative replication factor C subunit 5. (412 aa)
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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