(71 nodes) Nucleic acid-binding, OB-fold network (Besnoitia besnoiti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BESB_038260	Putative ribosomal protein S17. (116 aa)
	BESB_028730	Eukaryotic translation initiation factor 5A. (161 aa)
	BESB_023000	DNA ligase. (1026 aa)
	BESB_030630	Uncharacterized protein. (290 aa)
	BESB_028390	Putative 26S proteasome regulatory subunit 7; Belongs to the AAA ATPase family. (458 aa)
	BESB_086430	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family. (121 aa)
	BESB_086520	Ribosomal protein L2. (262 aa)
	BESB_033140	Putative DNA ligase (NAD+). (1699 aa)
	BESB_085170	Uncharacterized protein. (651 aa)
	BESB_082940	Putative 26S proteasome regulatory subunit 6b; Belongs to the AAA ATPase family. (410 aa)
	BESB_070800	Putative elongation factor P. (252 aa)
	BESB_079010	MCM2/3/5 family protein; Belongs to the MCM family. (1120 aa)
	BESB_065200	Ribosomal protein RPL8. (285 aa)
	BESB_024960	RNA polymerase Rpb7, N-terminal domain-containing protein. (201 aa)
	BESB_085330	Mcm10 domain-containing protein. (872 aa)
	BESB_073610	Putative exosomal 3'-5' exoribonuclease complex subunit. (283 aa)
	BESB_023540	Ribosomal protein RPS28. (68 aa)
	BESB_014540	Putative DNA replication licensing factor MCM5; Belongs to the MCM family. (793 aa)
	BESB_081400	Replication factor a protein 3 protein. (113 aa)
	BESB_066620	Aspartate-tRNA ligase. (550 aa)
	BESB_020630	Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (980 aa)
	BESB_083100	Ribosomal protein RPS23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	BESB_068120	MCM2/3/5 family protein; Belongs to the MCM family. (980 aa)
	BESB_011850	Uncharacterized protein. (361 aa)
	BESB_016700	S1 RNA binding domain-containing protein. (378 aa)
	BESB_058720	26S proteasome regulatory subunit; Belongs to the AAA ATPase family. (397 aa)
	BESB_017600	mRNA capping enzyme. (488 aa)
	BESB_012540	Putative LSU ribosomal protein L2P. (499 aa)
	BESB_084950	Putative tat-binding family protein; Belongs to the AAA ATPase family. (416 aa)
	BESB_063660	Single-strand binding protein. (452 aa)
	BESB_084920	RNB family domain-containing protein; Belongs to the RNR ribonuclease family. (1136 aa)
	BESB_082310	RNB family domain-containing protein; Belongs to the RNR ribonuclease family. (1096 aa)
	BESB_084290	Elongation factor p (Ef-p) kow family domain-containing protein. (199 aa)
	BESB_056260	Lysine--tRNA ligase. (688 aa)
	BESB_077390	Cold-shock DNA-binding domain-containing protein. (149 aa)
	BESB_073480	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase. (1199 aa)
	BESB_058480	Uncharacterized protein. (754 aa)
	BESB_074220	Eukaryotic initiation factor-2, alpha subunit. (350 aa)
	BESB_043260	Cold-shock DNA-binding domain-containing protein. (125 aa)
	BESB_066460	RNB domain-containing protein. (2080 aa)
	BESB_067460	S1 RNA binding domain-containing protein. (1522 aa)
	BESB_059630	Ribosomal protein RPS11; Belongs to the universal ribosomal protein uS17 family. (212 aa)
	BESB_065650	Putative 3'-5' exoribonuclease csl4. (231 aa)
	BESB_062880	tRNA binding domain-containing protein. (461 aa)
	BESB_066030	OB-fold nucleic acid binding domain-containing protein. (515 aa)
	MCM7	DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (867 aa)
	BESB_061330	Uncharacterized protein. (3101 aa)
	BESB_038730	S1-like domain-containing protein. (351 aa)
	BESB_061840	Putative exosome component 2. (330 aa)
	BESB_053540	Asparaginyl-tRNA synthetase (NOB+tRNA synthase). (672 aa)
	BESB_037820	tRNA (Uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (532 aa)
	BESB_004700	Nuclear factor NF7. (514 aa)
	BESB_053530	MCM domain-containing protein; Belongs to the MCM family. (1474 aa)
	BESB_048130	Uncharacterized protein. (413 aa)
	BESB_040320	Putative 30S ribosomal protein S12. (355 aa)
	BESB_040420	DNA helicase; Belongs to the MCM family. (982 aa)
	BESB_046480	BRCA-2_OB1 domain-containing protein. (4044 aa)
	BESB_049930	Putative 26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (444 aa)
	BESB_035190	DNA helicase; Belongs to the MCM family. (1065 aa)
	BESB_047720	tRNA ligases class II (D, K and N) domain-containing protein. (1023 aa)
	BESB_050490	Cold-shock DNA-binding domain-containing protein. (129 aa)
	BESB_035550	Replication factor a protein 3 protein. (153 aa)
	BESB_001530	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (257 aa)
	BESB_036910	Replication protein A subunit. (786 aa)
	BESB_037510	DNA-directed RNA polymerase II RPB7. (209 aa)
	BESB_040250	Putative DNA replication licensing factor MCM4; Belongs to the MCM family. (1062 aa)
	BESB_041050	26S proteasome regulatory subunit, S6a family AAA ATpase; Belongs to the AAA ATPase family. (427 aa)
	BESB_003940	Uncharacterized protein. (186 aa)
	BESB_007170	S1 RNA binding domain-containing protein. (2122 aa)
	BESB_008150	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
	BESB_010990	ATP-dependent DNA ligase domain-containing protein. (1497 aa)

Your Current Organism:

Besnoitia besnoiti

NCBI taxonomy Id: 94643
Other names: B. besnoiti

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BESB_001530	BESB_012540	A0A2A9MMW4	A0A2A9MB67	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Putative LSU ribosomal protein L2P.	0.947
BESB_001530	BESB_023540	A0A2A9MMW4	A0A2A9M8Z9	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Ribosomal protein RPS28.	0.999
BESB_001530	BESB_028730	A0A2A9MMW4	A0A2A9LYB4	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Eukaryotic translation initiation factor 5A.	0.845
BESB_001530	BESB_040320	A0A2A9MMW4	A0A2A9MK50	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Putative 30S ribosomal protein S12.	0.982
BESB_001530	BESB_043260	A0A2A9MMW4	A0A2A9MG31	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Cold-shock DNA-binding domain-containing protein.	0.489
BESB_001530	BESB_047720	A0A2A9MMW4	A0A2A9MM32	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	tRNA ligases class II (D, K and N) domain-containing protein.	0.467
BESB_001530	BESB_050490	A0A2A9MMW4	A0A2A9MM82	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Cold-shock DNA-binding domain-containing protein.	0.489
BESB_001530	BESB_053540	A0A2A9MMW4	A0A2A9MJ74	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Asparaginyl-tRNA synthetase (NOB+tRNA synthase).	0.482
BESB_001530	BESB_056260	A0A2A9MMW4	A0A2A9MDA5	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Lysine--tRNA ligase.	0.467
BESB_001530	BESB_059630	A0A2A9MMW4	A0A2A9MGH2	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Ribosomal protein RPS11; Belongs to the universal ribosomal protein uS17 family.	0.999
BESB_001530	BESB_061330	A0A2A9MMW4	A0A2A9MH10	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Uncharacterized protein.	0.445
BESB_001530	BESB_063660	A0A2A9MMW4	A0A2A9MC82	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Single-strand binding protein.	0.776
BESB_001530	BESB_065200	A0A2A9MMW4	A0A2A9M7N0	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Ribosomal protein RPL8.	0.972
BESB_001530	BESB_066620	A0A2A9MMW4	A0A2A9M9Q2	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Aspartate-tRNA ligase.	0.482
BESB_001530	BESB_067460	A0A2A9MMW4	A0A2A9MGD3	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	S1 RNA binding domain-containing protein.	0.445
BESB_001530	BESB_074220	A0A2A9MMW4	A0A2A9MFW6	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Eukaryotic initiation factor-2, alpha subunit.	0.999
BESB_001530	BESB_077390	A0A2A9MMW4	A0A2A9MDQ6	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Cold-shock DNA-binding domain-containing protein.	0.489
BESB_001530	BESB_083100	A0A2A9MMW4	A0A2A9M9W7	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Ribosomal protein RPS23; Belongs to the universal ribosomal protein uS12 family.	0.999
BESB_001530	BESB_084290	A0A2A9MMW4	A0A2A9MCV9	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Elongation factor p (Ef-p) kow family domain-containing protein.	0.833
BESB_001530	BESB_086430	A0A2A9MMW4	A0A2A9M2S2	Putative eukaryotic initiation factor-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.982