STRINGSTRING
BESB_010720 BESB_010720 BESB_010740 BESB_010740 BESB_010940 BESB_010940 BESB_086300 BESB_086300 BESB_086310 BESB_086310 BESB_029430 BESB_029430 BESB_033220 BESB_033220 BESB_023000 BESB_023000 BESB_025430 BESB_025430 BESB_021190 BESB_021190 BESB_026230 BESB_026230 BESB_086330 BESB_086330 BESB_015770 BESB_015770 BESB_026280 BESB_026280 BESB_018170 BESB_018170 BESB_012810 BESB_012810 BESB_033140 BESB_033140 BESB_085170 BESB_085170 BESB_081480 BESB_081480 BESB_077250 BESB_077250 BESB_028460 BESB_028460 BESB_028660 BESB_028660 BESB_086320 BESB_086320 BESB_084240 BESB_084240 BESB_080340 BESB_080340 BESB_085480 BESB_085480 BESB_012460 BESB_012460 BESB_024030 BESB_024030 BESB_078110 BESB_078110 BESB_019420 BESB_019420 BESB_027980 BESB_027980 BESB_030340 BESB_030340 FEN1 FEN1 BESB_022780 BESB_022780 BESB_028370 BESB_028370 BESB_024380 BESB_024380 BESB_029150 BESB_029150 BESB_017590 BESB_017590 BESB_024390 BESB_024390 BESB_026940 BESB_026940 BESB_021870 BESB_021870 BESB_019780 BESB_019780 BESB_020380 BESB_020380 BESB_017540 BESB_017540 BESB_024220 BESB_024220 NTH1 NTH1 BESB_016010 BESB_016010 BESB_066480 BESB_066480 BESB_016250 BESB_016250 BESB_020310 BESB_020310 BESB_070960 BESB_070960 BESB_012980 BESB_012980 BESB_017610 BESB_017610 BESB_068680 BESB_068680 BESB_021810 BESB_021810 BESB_073660 BESB_073660 BESB_017480 BESB_017480 BESB_074460 BESB_074460 BESB_060120 BESB_060120 BESB_082850 BESB_082850 BESB_061020 BESB_061020 BESB_015400 BESB_015400 BESB_082720 BESB_082720 BESB_063160 BESB_063160 BESB_077730 BESB_077730 BESB_084960 BESB_084960 BESB_053560 BESB_053560 BESB_078720 BESB_078720 BESB_076070 BESB_076070 BESB_076270 BESB_076270 BESB_061210 BESB_061210 BESB_061410 BESB_061410 BESB_047800 BESB_047800 BESB_056900 BESB_056900 BESB_043770 BESB_043770 BESB_044070 BESB_044070 BESB_065430 BESB_065430 BESB_043810 BESB_043810 BESB_050600 BESB_050600 BESB_071690 BESB_071690 BESB_064970 BESB_064970 BESB_071020 BESB_071020 BESB_064640 BESB_064640 BESB_049410 BESB_049410 BESB_075220 BESB_075220 BESB_058930 BESB_058930 BESB_061980 BESB_061980 BESB_065340 BESB_065340 BESB_067700 BESB_067700 BESB_066030 BESB_066030 BESB_036030 BESB_036030 BESB_068960 BESB_068960 BESB_000700 BESB_000700 BESB_036430 BESB_036430 BESB_068800 BESB_068800 BESB_036270 BESB_036270 BESB_002290 BESB_002290 BESB_037270 BESB_037270 BESB_004290 BESB_004290 BESB_040370 BESB_040370 BESB_053770 BESB_053770 BESB_001470 BESB_001470 BESB_054470 BESB_054470 BESB_001110 BESB_001110 BESB_043530 BESB_043530 BESB_036020 BESB_036020 BESB_036820 BESB_036820 BESB_053740 BESB_053740 BESB_053840 BESB_053840 BESB_045330 BESB_045330 BESB_054240 BESB_054240 BESB_052010 BESB_052010 BESB_054480 BESB_054480 BESB_055080 BESB_055080 BESB_053030 BESB_053030 BESB_005400 BESB_005400 BESB_055330 BESB_055330 BESB_046480 BESB_046480 BESB_007610 BESB_007610 BESB_048180 BESB_048180 BESB_009210 BESB_009210 BESB_057210 BESB_057210 BESB_049780 BESB_049780 BESB_004150 BESB_004150 BESB_047150 BESB_047150 BESB_045920 BESB_045920 BESB_038190 BESB_038190 BESB_038290 BESB_038290 BESB_047520 BESB_047520 BESB_038790 BESB_038790 BESB_006850 BESB_006850 BESB_048020 BESB_048020 BESB_050390 BESB_050390 BESB_048720 BESB_048720 BESB_036840 BESB_036840 BESB_037140 BESB_037140 BESB_037640 BESB_037640 BESB_000030 BESB_000030 BESB_009960 BESB_009960 BESB_035510 BESB_035510 BESB_036910 BESB_036910 BESB_040140 BESB_040140 BESB_037510 BESB_037510 BESB_037450 BESB_037450 BESB_038710 BESB_038710 BESB_039610 BESB_039610 BESB_038900 BESB_038900 BESB_006720 BESB_006720 BESB_004170 BESB_004170 BESB_002940 BESB_002940 BESB_006570 BESB_006570 BESB_005940 BESB_005940 BESB_003810 BESB_003810 BESB_004930 BESB_004930 BESB_007690 BESB_007690 BESB_008150 BESB_008150 BESB_005730 BESB_005730 BESB_006430 BESB_006430 BESB_010990 BESB_010990 BESB_008640 BESB_008640 BESB_011190 BESB_011190
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BESB_010720CHY zinc finger domain-containing protein. (555 aa)
BESB_010740Uncharacterized protein. (2736 aa)
BESB_010940Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region domain-containing protein. (364 aa)
BESB_086300RNA polymerase B. (1056 aa)
BESB_086310DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (568 aa)
BESB_029430CPSF_A domain-containing protein. (1973 aa)
BESB_033220Uncharacterized protein. (693 aa)
BESB_023000DNA ligase. (1026 aa)
BESB_025430Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (456 aa)
BESB_021190POLXc domain-containing protein. (1084 aa)
BESB_026230OGG_N domain-containing protein. (915 aa)
BESB_086330Uncharacterized protein. (476 aa)
BESB_015770DNA repair protein Rad4 domain-containing protein. (2099 aa)
BESB_026280General transcription factor IIH polypeptide 2 GTF2H2. (516 aa)
BESB_018170ATP-dependent DNA helicase, RecQ family protein. (1677 aa)
BESB_012810DNA-directed RNA polymerase II RPABC4. (69 aa)
BESB_033140Putative DNA ligase (NAD+). (1699 aa)
BESB_085170Uncharacterized protein. (651 aa)
BESB_081480DNA-directed RNA polymerase II RPB3. (446 aa)
BESB_077250RecF/RecN/SMC N terminal domain-containing protein. (1603 aa)
BESB_028460Uncharacterized protein. (744 aa)
BESB_028660Histone H2B; Belongs to the histone H2B family. (116 aa)
BESB_086320Putative RNA polymerase C2. (608 aa)
BESB_084240DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1255 aa)
BESB_080340Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family. (1157 aa)
BESB_085480Cyclin domain protein, cyclin H family protein. (705 aa)
BESB_012460XPA_C domain-containing protein. (199 aa)
BESB_024030Histone H2B; Belongs to the histone H2B family. (123 aa)
BESB_078110Cullin family protein; Belongs to the cullin family. (807 aa)
BESB_019420Uncharacterized protein. (2162 aa)
BESB_027980Mre11 DNA-binding domain-containing protein. (1201 aa)
BESB_030340Uncharacterized protein. (247 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (539 aa)
BESB_022780Polynucleotide kinase 3 phosphatase. (730 aa)
BESB_028370Toprim domain-containing protein. (1604 aa)
BESB_024380SWI2/SNF2 ISWI-like SANT. (1206 aa)
BESB_029150Uncharacterized protein. (538 aa)
BESB_017590ERCC4 domain-containing protein. (2024 aa)
BESB_024390Uncharacterized protein. (519 aa)
BESB_026940UV excision repair protein Rad23 protein. (362 aa)
BESB_021870EF hand domain-containing protein. (241 aa)
BESB_019780DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1512 aa)
BESB_020380DNA repair metallo-beta-lactamase. (278 aa)
BESB_017540XPA binding protein 2 family protein. (995 aa)
BESB_024220Cell division protein CDC48AP. (987 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. (524 aa)
BESB_016010DNA polymerase I domain-containing protein. (1486 aa)
BESB_066480DNA-directed RNA polymerase II RPB9. (263 aa)
BESB_016250Putative replication factor C subunit 4. (350 aa)
BESB_020310Ribosomal-ubiquitin protein RPL40. (129 aa)
BESB_070960Uncharacterized protein. (1679 aa)
BESB_012980CAM Kinase family, incomplete catalytic triad. (591 aa)
BESB_017610Uncharacterized protein. (1520 aa)
BESB_068680ENDO3c domain-containing protein. (1090 aa)
BESB_021810Uncharacterized protein. (617 aa)
BESB_073660Ku70/Ku80 beta-barrel domain-containing protein. (1116 aa)
BESB_017480Histone H2B; Belongs to the histone H2B family. (116 aa)
BESB_074460Helix-hairpin-helix motif domain-containing protein. (738 aa)
BESB_060120DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (789 aa)
BESB_082850Uncharacterized protein. (2904 aa)
BESB_061020Uncharacterized protein. (539 aa)
BESB_015400Uncharacterized protein. (511 aa)
BESB_082720Transcription elongation factor A TFIIS. (420 aa)
BESB_063160RuvB-like helicase; Belongs to the RuvB family. (463 aa)
BESB_077730DNA excision repair helicase. (1053 aa)
BESB_084960MutS domain V domain-containing protein. (916 aa)
BESB_053560Ubiquitin fusion degradation protein UFD1CY. (324 aa)
BESB_078720DNA-directed RNA polymerase II RPB11A. (166 aa)
BESB_076070Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (6188 aa)
BESB_0762705'-3' exonuclease, N-terminal resolvase family domain-containing protein. (956 aa)
BESB_061210DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1902 aa)
BESB_061410WD_REPEATS_REGION domain-containing protein. (1620 aa)
BESB_047800RMI1_N domain-containing protein. (615 aa)
BESB_056900Poly(ADP-ribose) glycohydrolase. (549 aa)
BESB_043770Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (287 aa)
BESB_044070DNA polymerase family B protein. (2985 aa)
BESB_065430RAB43, member RAS oncogene family protein. (298 aa)
BESB_043810CDK-activating kinase assembly factor MAT1 protein. (277 aa)
BESB_050600Uncharacterized protein. (866 aa)
BESB_071690Rhoptry protein ROP18. (627 aa)
BESB_064970XPG N-terminal domain-containing protein. (2012 aa)
BESB_071020Mov34/MPN/PAD-1 family protein. (463 aa)
BESB_064640Protein kinase domain-containing protein. (1525 aa)
BESB_049410DNA_mis_repair domain-containing protein. (1160 aa)
BESB_075220Uncharacterized protein. (2239 aa)
BESB_058930Uncharacterized protein. (571 aa)
BESB_061980Transcription factor s-ii (Tfiis), central domain-containing protein. (1391 aa)
BESB_065340RAB43, member RAS oncogene family protein. (298 aa)
BESB_067700Serine/threonine-protein phosphatase. (304 aa)
BESB_066030OB-fold nucleic acid binding domain-containing protein. (515 aa)
BESB_036030Uncharacterized protein. (2689 aa)
BESB_068960DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (631 aa)
BESB_000700USP domain-containing protein; Belongs to the peptidase C19 family. (1201 aa)
BESB_036430Uncharacterized protein. (2576 aa)
BESB_068800Ubiquitin fusion degradation protein UFD1AP. (772 aa)
BESB_036270Putative replication factor C subunit 2. (357 aa)
BESB_002290ERCC4 domain-containing protein. (1377 aa)
BESB_037270ATPase, AAA family protein. (1146 aa)
BESB_004290DNA repair protein rad10 subfamily protein. (373 aa)
BESB_040370Putative polyubiquitin UbC. (613 aa)
BESB_053770DNA-directed RNA polymerase II RPB6. (149 aa)
BESB_001470Poly(ADP-ribose) glycohydrolase. (1131 aa)
BESB_054470RMI1_N domain-containing protein. (835 aa)
BESB_001110SWI2/SNF2-containing protein RAD26. (1625 aa)
BESB_043530WD domain, G-beta repeat domain containing protein. (515 aa)
BESB_036020Centrin family protein. (234 aa)
BESB_036820PCI domain-containing protein. (541 aa)
BESB_053740Uncharacterized protein. (1123 aa)
BESB_053840Poly [ADP-ribose] polymerase. (1008 aa)
BESB_045330DNA-directed RNA polymerase II RPB5. (205 aa)
BESB_054240Replication factor C subunit 1. (1247 aa)
BESB_052010Putative peptidyl-prolyl cis-trans isomerase E. (144 aa)
BESB_054480ImpB/MucB/SamB family protein. (1288 aa)
BESB_055080GIY-YIG domain-containing protein. (1252 aa)
BESB_053030TFIIH basal transcription factor complex helicase XPB subunit. (943 aa)
BESB_005400Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (2592 aa)
BESB_055330USP domain-containing protein. (2895 aa)
BESB_046480BRCA-2_OB1 domain-containing protein. (4044 aa)
BESB_007610SWI2/SNF2 ISWI-like (AT hook). (1578 aa)
BESB_048180ATP-dependent DNA helicase, RecQ family protein. (1632 aa)
BESB_009210Endonuclease/exonuclease/phosphatase family protein. (696 aa)
BESB_057210DNA polymerase epsilon subunit B protein. (871 aa)
BESB_049780General transcription factor IIH polypeptide 3 GTF2H3. (582 aa)
BESB_004150Tetratricopeptide repeat-containing protein. (1181 aa)
BESB_047150AAA domain-containing protein. (739 aa)
BESB_045920Uncharacterized protein. (4853 aa)
BESB_038190DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily. (352 aa)
BESB_038290Cell division protein CDC48CY. (808 aa)
BESB_047520Uncharacterized protein. (712 aa)
BESB_038790DNA-directed RNA polymerase II RPB10. (72 aa)
BESB_006850Ribosomal-ubiquitin protein RPS27A. (156 aa)
BESB_048020DNA_pol_B domain-containing protein. (3935 aa)
BESB_050390Putative histone deacetylase. (1791 aa)
BESB_048720Uncharacterized protein. (793 aa)
BESB_036840Uncharacterized protein. (1448 aa)
BESB_037140ULK kinase; Belongs to the protein kinase superfamily. (370 aa)
BESB_037640NPL4 family protein. (509 aa)
BESB_000030Uncharacterized protein. (737 aa)
BESB_009960DNA-directed RNA polymerase II RPB4. (130 aa)
BESB_035510General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (920 aa)
BESB_036910Replication protein A subunit. (786 aa)
BESB_040140RuvB-like helicase; Belongs to the RuvB family. (495 aa)
BESB_037510DNA-directed RNA polymerase II RPB7. (209 aa)
BESB_037450KH domain-containing protein. (419 aa)
BESB_038710Uncharacterized protein. (850 aa)
BESB_039610DNA_MISMATCH_REPAIR_2 domain-containing protein. (2072 aa)
BESB_038900General transcription factor IIH polypeptide 5 GTF2H5. (112 aa)
BESB_006720SprT domain-containing protein. (933 aa)
BESB_004170WD domain, G-beta repeat-containing protein. (1704 aa)
BESB_002940Putative CMP/dCMP deaminase, zinc-binding. (189 aa)
BESB_006570Uncharacterized protein. (496 aa)
BESB_005940Centrin. (222 aa)
BESB_003810Putative activating signal cointegrator 1 complex subunit 3. (2685 aa)
BESB_004930Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (7366 aa)
BESB_007690Putative replication factor C subunit 5. (412 aa)
BESB_008150DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
BESB_005730Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (317 aa)
BESB_006430BSD domain-containing protein. (1019 aa)
BESB_010990ATP-dependent DNA ligase domain-containing protein. (1497 aa)
BESB_008640XPG N-terminal domain-containing protein. (899 aa)
BESB_011190Uncharacterized protein. (1767 aa)
Your Current Organism:
Besnoitia besnoiti
NCBI taxonomy Id: 94643
Other names: B. besnoiti
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