(14 nodes) Ubiquitin homologues network (Besnoitia besnoiti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BESB_012310	Ubiquitin family protein. (81 aa)
	BESB_047310	Ubiquitin family protein. (1022 aa)
	BESB_049460	Putative small ubiquitin family modifier. (92 aa)
	BESB_040370	Putative polyubiquitin UbC. (613 aa)
	BESB_062870	Uncharacterized protein. (1097 aa)
	BESB_056770	Ubiquitin family protein. (540 aa)
	BESB_005000	Putative ubiquitin. (255 aa)
	BESB_006850	Ribosomal-ubiquitin protein RPS27A. (156 aa)
	BESB_001880	Ubiquitin-like domain-containing protein. (185 aa)
	BESB_020310	Ribosomal-ubiquitin protein RPL40. (129 aa)
	BESB_026940	UV excision repair protein Rad23 protein. (362 aa)
	BESB_068520	3-oxo-5-alpha-steroid 4-dehydrogenase. (298 aa)
	BESB_055590	Ubiquitin family protein. (400 aa)
	BESB_045410	Ubiquitin family protein. (607 aa)

Your Current Organism:

Besnoitia besnoiti

NCBI taxonomy Id: 94643
Other names: B. besnoiti

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BESB_005000	BESB_026940	A0A2A9MJR8	A0A2A9M8K5	Putative ubiquitin.	UV excision repair protein Rad23 protein.	0.580
BESB_006850	BESB_012310	A0A2A9MM27	A0A2A9M3V1	Ribosomal-ubiquitin protein RPS27A.	Ubiquitin family protein.	0.919
BESB_006850	BESB_020310	A0A2A9MM27	A0A2A9M9N0	Ribosomal-ubiquitin protein RPS27A.	Ribosomal-ubiquitin protein RPL40.	0.999
BESB_006850	BESB_026940	A0A2A9MM27	A0A2A9M8K5	Ribosomal-ubiquitin protein RPS27A.	UV excision repair protein Rad23 protein.	0.948
BESB_006850	BESB_040370	A0A2A9MM27	A0A2A9MI55	Ribosomal-ubiquitin protein RPS27A.	Putative polyubiquitin UbC.	0.987
BESB_006850	BESB_045410	A0A2A9MM27	A0A2A9MEQ0	Ribosomal-ubiquitin protein RPS27A.	Ubiquitin family protein.	0.885
BESB_006850	BESB_047310	A0A2A9MM27	A0A2A9MF68	Ribosomal-ubiquitin protein RPS27A.	Ubiquitin family protein.	0.885
BESB_006850	BESB_049460	A0A2A9MM27	A0A2A9MHT7	Ribosomal-ubiquitin protein RPS27A.	Putative small ubiquitin family modifier.	0.857
BESB_006850	BESB_055590	A0A2A9MM27	A0A2A9MBP9	Ribosomal-ubiquitin protein RPS27A.	Ubiquitin family protein.	0.885
BESB_006850	BESB_056770	A0A2A9MM27	A0A2A9MJ81	Ribosomal-ubiquitin protein RPS27A.	Ubiquitin family protein.	0.879
BESB_006850	BESB_062870	A0A2A9MM27	A0A2A9MJ30	Ribosomal-ubiquitin protein RPS27A.	Uncharacterized protein.	0.919
BESB_012310	BESB_006850	A0A2A9M3V1	A0A2A9MM27	Ubiquitin family protein.	Ribosomal-ubiquitin protein RPS27A.	0.919
BESB_012310	BESB_020310	A0A2A9M3V1	A0A2A9M9N0	Ubiquitin family protein.	Ribosomal-ubiquitin protein RPL40.	0.949
BESB_012310	BESB_026940	A0A2A9M3V1	A0A2A9M8K5	Ubiquitin family protein.	UV excision repair protein Rad23 protein.	0.901
BESB_012310	BESB_045410	A0A2A9M3V1	A0A2A9MEQ0	Ubiquitin family protein.	Ubiquitin family protein.	0.781
BESB_012310	BESB_047310	A0A2A9M3V1	A0A2A9MF68	Ubiquitin family protein.	Ubiquitin family protein.	0.781
BESB_012310	BESB_049460	A0A2A9M3V1	A0A2A9MHT7	Ubiquitin family protein.	Putative small ubiquitin family modifier.	0.775
BESB_012310	BESB_055590	A0A2A9M3V1	A0A2A9MBP9	Ubiquitin family protein.	Ubiquitin family protein.	0.781
BESB_012310	BESB_056770	A0A2A9M3V1	A0A2A9MJ81	Ubiquitin family protein.	Ubiquitin family protein.	0.724
BESB_020310	BESB_006850	A0A2A9M9N0	A0A2A9MM27	Ribosomal-ubiquitin protein RPL40.	Ribosomal-ubiquitin protein RPS27A.	0.999