26 items (Ramazzottius varieornatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RvY_02307-1	Uncharacterized protein. (733 aa)
	RvY_02387-1	SIRT7. (402 aa)
	RvY_05383-1	Uncharacterized protein. (570 aa)
	RvY_06309-4	Hist_deacetyl domain-containing protein. (103 aa)
	RvY_10869-1	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (423 aa)
	RvY_09310-2	HDAC_interact domain-containing protein. (1709 aa)
	RvY_11702-1	SIRT1. (514 aa)
	RvY_09522-1	Hist_deacetyl domain-containing protein. (538 aa)
	RvY_09310	HDAC_interact domain-containing protein. (1718 aa)
	RvY_10046-1	UBP-type domain-containing protein. (144 aa)
	RvY_10352-1	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1017 aa)
	RvY_07938-1	WD_REPEATS_REGION domain-containing protein. (542 aa)
	RvY_09483	Uncharacterized protein. (1239 aa)
	RvY_07958-1	Uncharacterized protein. (838 aa)
	RvY_06309-2	Uncharacterized protein. (145 aa)
	RvY_06534-1	Uncharacterized protein. (139 aa)
	RvY_08625-1	Uncharacterized protein. (637 aa)
	RvY_05166-1	Uncharacterized protein. (523 aa)
	RvY_12164-1	SIRT6. (340 aa)
	RvY_02480-1	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (458 aa)
	RvY_09483-2	Uncharacterized protein. (1100 aa)
	RvY_18644	Hist_deacetyl domain-containing protein. (368 aa)
	RvY_18357-1	WD_REPEATS_REGION domain-containing protein. (426 aa)
	RvY_15786-1	MBD domain-containing protein. (314 aa)
	RvY_13730-1	ELM2 domain-containing protein. (400 aa)
	RvY_18644-1	Hist_deacetyl domain-containing protein. (412 aa)

Your Current Organism:

Ramazzottius varieornatus

NCBI taxonomy Id: 947166
Other names: R. varieornatus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RvY_02307-1	RvY_02480-1	A0A1D1URB9	A0A1D1UJW7	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.848
RvY_02307-1	RvY_05383-1	A0A1D1URB9	A0A1D1UUV3	Uncharacterized protein.	Uncharacterized protein.	0.889
RvY_02307-1	RvY_06309-2	A0A1D1URB9	A0A1D1V7S4	Uncharacterized protein.	Uncharacterized protein.	0.700
RvY_02307-1	RvY_06309-4	A0A1D1URB9	A0A1D1UY45	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.700
RvY_02307-1	RvY_06534-1	A0A1D1URB9	A0A1D1V7L8	Uncharacterized protein.	Uncharacterized protein.	0.848
RvY_02307-1	RvY_07938-1	A0A1D1URB9	A0A1D1VC94	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.944
RvY_02307-1	RvY_07958-1	A0A1D1URB9	A0A1D1V9Z0	Uncharacterized protein.	Uncharacterized protein.	0.700
RvY_02307-1	RvY_09522-1	A0A1D1URB9	A0A1D1VF35	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.848
RvY_02307-1	RvY_10046-1	A0A1D1URB9	A0A1D1VDK7	Uncharacterized protein.	UBP-type domain-containing protein.	0.700
RvY_02307-1	RvY_10352-1	A0A1D1URB9	A0A1D1VCG3	Uncharacterized protein.	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.	0.700
RvY_02307-1	RvY_10869-1	A0A1D1URB9	A0A1D1VN53	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.848
RvY_02307-1	RvY_13730-1	A0A1D1URB9	A0A1D1VSY3	Uncharacterized protein.	ELM2 domain-containing protein.	0.676
RvY_02307-1	RvY_15786-1	A0A1D1URB9	A0A1D1W2U9	Uncharacterized protein.	MBD domain-containing protein.	0.982
RvY_02307-1	RvY_18357-1	A0A1D1URB9	A0A1D1W5G2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.944
RvY_02307-1	RvY_18644	A0A1D1URB9	A0A1D1W802	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.700
RvY_02307-1	RvY_18644-1	A0A1D1URB9	A0A1D1WAS5	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.700
RvY_02387-1	RvY_02480-1	A0A1D1UJJ9	A0A1D1UJW7	SIRT7.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.470
RvY_02387-1	RvY_06309-2	A0A1D1UJJ9	A0A1D1V7S4	SIRT7.	Uncharacterized protein.	0.429
RvY_02387-1	RvY_06309-4	A0A1D1UJJ9	A0A1D1UY45	SIRT7.	Hist_deacetyl domain-containing protein.	0.429
RvY_02387-1	RvY_06534-1	A0A1D1UJJ9	A0A1D1V7L8	SIRT7.	Uncharacterized protein.	0.470