Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BKG76_13725 | OHU21653.1 | BKG76_13725 | BKG76_13730 | Ornithine decarboxylase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.498 |
| BKG76_13725 | OHU21654.1 | BKG76_13725 | BKG76_13735 | Ornithine decarboxylase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.403 |
| OHU18227.1 | OHU22423.1 | BKG76_23905 | BKG76_18395 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.633 |
| OHU18227.1 | OHU31040.1 | BKG76_23905 | BKG76_04935 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.645 |
| OHU19202.1 | OHU22423.1 | BKG76_22315 | BKG76_18395 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.571 |
| OHU20890.1 | OHU20891.1 | BKG76_09100 | BKG76_09105 | DNA (cytosine-5-)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Very short patch repair endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.770 |
| OHU20890.1 | OHU20895.1 | BKG76_09100 | BKG76_09125 | DNA (cytosine-5-)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.884 |
| OHU20891.1 | OHU20890.1 | BKG76_09105 | BKG76_09100 | Very short patch repair endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA (cytosine-5-)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.770 |
| OHU20891.1 | OHU20892.1 | BKG76_09105 | BKG76_09110 | Very short patch repair endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.461 |
| OHU20891.1 | OHU20894.1 | BKG76_09105 | BKG76_09120 | Very short patch repair endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.432 |
| OHU20891.1 | OHU20895.1 | BKG76_09105 | BKG76_09125 | Very short patch repair endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.562 |
| OHU20892.1 | OHU20891.1 | BKG76_09110 | BKG76_09105 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Very short patch repair endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.461 |
| OHU20892.1 | OHU20894.1 | BKG76_09110 | BKG76_09120 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.542 |
| OHU20892.1 | OHU20895.1 | BKG76_09110 | BKG76_09125 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.516 |
| OHU20894.1 | OHU20891.1 | BKG76_09120 | BKG76_09105 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Very short patch repair endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.432 |
| OHU20894.1 | OHU20892.1 | BKG76_09120 | BKG76_09110 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.542 |
| OHU20894.1 | OHU20895.1 | BKG76_09120 | BKG76_09125 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.952 |
| OHU20895.1 | OHU20890.1 | BKG76_09125 | BKG76_09100 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA (cytosine-5-)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.884 |
| OHU20895.1 | OHU20891.1 | BKG76_09125 | BKG76_09105 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Very short patch repair endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.562 |
| OHU20895.1 | OHU20892.1 | BKG76_09125 | BKG76_09110 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.516 |
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