STRINGSTRING
OHU18798.1 OHU18798.1 OHU19238.1 OHU19238.1 pyrF pyrF carA carA OHU18880.1 OHU18880.1 pyrB pyrB apt apt OHU18804.1 OHU18804.1 OHU18801.1 OHU18801.1 OHU18800.1 OHU18800.1 OHU18799.1 OHU18799.1 alc alc OHU22388.1 OHU22388.1 OHU22222.1 OHU22222.1 upp upp OHU22191.1 OHU22191.1 uao_2 uao_2 pyrD pyrD purD purD purF purF OHU31033.1 OHU31033.1 OHU30919.1 OHU30919.1 OHU30439.1 OHU30439.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OHU18798.1Xanthine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (650 aa)
OHU19238.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
pyrFOrotidine 5'-phosphate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the OMP decarboxylase family. Type 2 subfamily. (282 aa)
carACarbamoyl phosphate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family. (376 aa)
OHU18880.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
pyrBAspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (317 aa)
aptAdenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (177 aa)
OHU18804.1XshC-Cox1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
OHU18801.1Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. (302 aa)
OHU18800.1Hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily. (107 aa)
OHU18799.12-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)
alcAllantoicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the allantoicase family. (338 aa)
OHU22388.1Cysteine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
OHU22222.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (505 aa)
uppUracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. (213 aa)
OHU22191.1Thymidine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
uao_22-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (173 aa)
pyrDDihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (353 aa)
purDPhosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family. (419 aa)
purFAmidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (504 aa)
OHU31033.1Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
OHU30919.1Methylmalonate-semialdehyde dehydrogenase (acylating); Derived by automated computational analysis using gene prediction method: Protein Homology. (505 aa)
OHU30439.1Cysteine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
Your Current Organism:
Mycobacteroides franklinii
NCBI taxonomy Id: 948102
Other names: ATCC BAA-2149, DSM 45524, M. franklinii, Mycobacterium franklinii, Mycobacterium franklinii Nogueira et al. 2015, Mycobacterium sp. CV02, Mycobacteroides franklinii (Nogueira et al. 2015) Gupta et al. 2018, strain CV002
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