STRINGSTRING
OHU19283.1 OHU19283.1 OHU19356.1 OHU19356.1 OHU19355.1 OHU19355.1 OHU21844.1 OHU21844.1 OHU21338.1 OHU21338.1 OHU21254.1 OHU21254.1 OHU20781.1 OHU20781.1 OHU31151.1 OHU31151.1 OHU31150.1 OHU31150.1 OHU30996.1 OHU30996.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OHU19283.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
OHU19356.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
OHU19355.1Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
OHU21844.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
OHU21338.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
OHU21254.1Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
OHU20781.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
OHU31151.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
OHU31150.1Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
OHU30996.1Type 1 glutamine amidotransferase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
Your Current Organism:
Mycobacteroides franklinii
NCBI taxonomy Id: 948102
Other names: ATCC BAA-2149, DSM 45524, M. franklinii, Mycobacterium franklinii, Mycobacterium franklinii Nogueira et al. 2015, Mycobacterium sp. CV02, Mycobacteroides franklinii (Nogueira et al. 2015) Gupta et al. 2018, strain CV002
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