(12 nodes) Checkpoint clamp complex, and DNA replication factor C complex network (Tinamus guttatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N309_11473	Cell cycle checkpoint protein RAD1. (277 aa)
	N309_02197	Replication factor C subunit 5. (301 aa)
	N309_10346	RAD9, HUS1, RAD1-interacting nuclear orphan protein 1. (251 aa)
	N309_12274	Checkpoint protein; Belongs to the HUS1 family. (284 aa)
	N309_06266	Replication factor C subunit 3. (356 aa)
	N309_01126	Cell cycle checkpoint protein RAD17. (679 aa)
	N309_12096	Ankyrin repeat domain-containing protein 32. (197 aa)
	N309_09143	ATPase family AAA domain-containing protein 5. (1773 aa)
	N309_09271	Replication factor C subunit 2. (316 aa)
	N309_07174	Cell division cycle-associated protein 7. (409 aa)
	N309_05966	Cell cycle checkpoint control protein RAD9B. (421 aa)
	N309_07986	Replication factor C subunit 4. (318 aa)

Your Current Organism:

Tinamus guttatus

NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N309_01126	N309_02197	A0A099ZD35	A0A099Z495	Cell cycle checkpoint protein RAD17.	Replication factor C subunit 5.	0.999
N309_01126	N309_05966	A0A099ZD35	A0A099ZNE2	Cell cycle checkpoint protein RAD17.	Cell cycle checkpoint control protein RAD9B.	0.998
N309_01126	N309_06266	A0A099ZD35	A0A099Z8H2	Cell cycle checkpoint protein RAD17.	Replication factor C subunit 3.	0.999
N309_01126	N309_07174	A0A099ZD35	A0A099ZMM3	Cell cycle checkpoint protein RAD17.	Cell division cycle-associated protein 7.	0.987
N309_01126	N309_07986	A0A099ZD35	A0A099ZSJ9	Cell cycle checkpoint protein RAD17.	Replication factor C subunit 4.	0.999
N309_01126	N309_09143	A0A099ZD35	A0A099ZGC5	Cell cycle checkpoint protein RAD17.	ATPase family AAA domain-containing protein 5.	0.964
N309_01126	N309_09271	A0A099ZD35	A0A099ZGG4	Cell cycle checkpoint protein RAD17.	Replication factor C subunit 2.	0.999
N309_01126	N309_10346	A0A099ZD35	A0A099Z534	Cell cycle checkpoint protein RAD17.	RAD9, HUS1, RAD1-interacting nuclear orphan protein 1.	0.602
N309_01126	N309_11473	A0A099ZD35	A0A099Z1L3	Cell cycle checkpoint protein RAD17.	Cell cycle checkpoint protein RAD1.	0.994
N309_01126	N309_12096	A0A099ZD35	A0A099ZF04	Cell cycle checkpoint protein RAD17.	Ankyrin repeat domain-containing protein 32.	0.887
N309_01126	N309_12274	A0A099ZD35	A0A099Z7V2	Cell cycle checkpoint protein RAD17.	Checkpoint protein; Belongs to the HUS1 family.	0.997
N309_02197	N309_01126	A0A099Z495	A0A099ZD35	Replication factor C subunit 5.	Cell cycle checkpoint protein RAD17.	0.999
N309_02197	N309_05966	A0A099Z495	A0A099ZNE2	Replication factor C subunit 5.	Cell cycle checkpoint control protein RAD9B.	0.980
N309_02197	N309_06266	A0A099Z495	A0A099Z8H2	Replication factor C subunit 5.	Replication factor C subunit 3.	0.999
N309_02197	N309_07174	A0A099Z495	A0A099ZMM3	Replication factor C subunit 5.	Cell division cycle-associated protein 7.	0.936
N309_02197	N309_07986	A0A099Z495	A0A099ZSJ9	Replication factor C subunit 5.	Replication factor C subunit 4.	0.999
N309_02197	N309_09143	A0A099Z495	A0A099ZGC5	Replication factor C subunit 5.	ATPase family AAA domain-containing protein 5.	0.998
N309_02197	N309_09271	A0A099Z495	A0A099ZGG4	Replication factor C subunit 5.	Replication factor C subunit 2.	0.999
N309_02197	N309_10346	A0A099Z495	A0A099Z534	Replication factor C subunit 5.	RAD9, HUS1, RAD1-interacting nuclear orphan protein 1.	0.618
N309_02197	N309_11473	A0A099Z495	A0A099Z1L3	Replication factor C subunit 5.	Cell cycle checkpoint protein RAD1.	0.974