(5 nodes) Mixed, incl. CAMSAP CH domain, and Sperm connecting piece network (Tinamus guttatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N309_07829	Calponin homology domain-containing protein 2. (309 aa)
	N309_07832	Uncharacterized protein. (251 aa)
	N309_07831	Uncharacterized protein. (109 aa)
	N309_06085	Uncharacterized protein CXorf22. (872 aa)
	N309_07830	Uncharacterized protein. (115 aa)

Your Current Organism:

Tinamus guttatus

NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N309_06085	N309_07829	A0A099YXW2	A0A099YV07	Uncharacterized protein CXorf22.	Calponin homology domain-containing protein 2.	0.899
N309_06085	N309_07830	A0A099YXW2	A0A099YZT2	Uncharacterized protein CXorf22.	Uncharacterized protein.	0.744
N309_06085	N309_07831	A0A099YXW2	A0A099YXD9	Uncharacterized protein CXorf22.	Uncharacterized protein.	0.893
N309_06085	N309_07832	A0A099YXW2	A0A099YX58	Uncharacterized protein CXorf22.	Uncharacterized protein.	0.929
N309_07829	N309_06085	A0A099YV07	A0A099YXW2	Calponin homology domain-containing protein 2.	Uncharacterized protein CXorf22.	0.899
N309_07829	N309_07830	A0A099YV07	A0A099YZT2	Calponin homology domain-containing protein 2.	Uncharacterized protein.	0.856
N309_07829	N309_07831	A0A099YV07	A0A099YXD9	Calponin homology domain-containing protein 2.	Uncharacterized protein.	0.887
N309_07829	N309_07832	A0A099YV07	A0A099YX58	Calponin homology domain-containing protein 2.	Uncharacterized protein.	0.899
N309_07830	N309_06085	A0A099YZT2	A0A099YXW2	Uncharacterized protein.	Uncharacterized protein CXorf22.	0.744
N309_07830	N309_07829	A0A099YZT2	A0A099YV07	Uncharacterized protein.	Calponin homology domain-containing protein 2.	0.856
N309_07830	N309_07831	A0A099YZT2	A0A099YXD9	Uncharacterized protein.	Uncharacterized protein.	0.810
N309_07830	N309_07832	A0A099YZT2	A0A099YX58	Uncharacterized protein.	Uncharacterized protein.	0.818
N309_07831	N309_06085	A0A099YXD9	A0A099YXW2	Uncharacterized protein.	Uncharacterized protein CXorf22.	0.893
N309_07831	N309_07829	A0A099YXD9	A0A099YV07	Uncharacterized protein.	Calponin homology domain-containing protein 2.	0.887
N309_07831	N309_07830	A0A099YXD9	A0A099YZT2	Uncharacterized protein.	Uncharacterized protein.	0.810
N309_07831	N309_07832	A0A099YXD9	A0A099YX58	Uncharacterized protein.	Uncharacterized protein.	0.935
N309_07832	N309_06085	A0A099YX58	A0A099YXW2	Uncharacterized protein.	Uncharacterized protein CXorf22.	0.929
N309_07832	N309_07829	A0A099YX58	A0A099YV07	Uncharacterized protein.	Calponin homology domain-containing protein 2.	0.899
N309_07832	N309_07830	A0A099YX58	A0A099YZT2	Uncharacterized protein.	Uncharacterized protein.	0.818
N309_07832	N309_07831	A0A099YX58	A0A099YXD9	Uncharacterized protein.	Uncharacterized protein.	0.935