11 items (Tinamus guttatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N309_11284	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (243 aa)
	N309_05056	Uncharacterized protein. (37 aa)
	N309_07994	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (143 aa)
	N309_03099	Uncharacterized protein. (109 aa)
	N309_06064	60S ribosomal protein L35. (76 aa)
	N309_10530	Uncharacterized protein. (131 aa)
	N309_07568	60S ribosomal protein L5. (296 aa)
	N309_01526	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (349 aa)
	N309_02358	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family. (149 aa)
	N309_07742	Uncharacterized protein. (127 aa)
	N309_14896	Uncharacterized protein. (145 aa)

Your Current Organism:

Tinamus guttatus

NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N309_01526	N309_02358	A0A099ZH27	A0A099ZJP2	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	0.999
N309_01526	N309_03099	A0A099ZH27	A0A099Z231	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.999
N309_01526	N309_05056	A0A099ZH27	A0A099YYL4	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.999
N309_01526	N309_06064	A0A099ZH27	A0A099Z6J8	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	60S ribosomal protein L35.	0.999
N309_01526	N309_07568	A0A099ZH27	A0A099ZBN8	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	60S ribosomal protein L5.	0.999
N309_01526	N309_07742	A0A099ZH27	A0A099ZNG1	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.999
N309_01526	N309_07994	A0A099ZH27	A0A099YZZ9	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.999
N309_01526	N309_10530	A0A099ZH27	A0A099Z8X0	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.999
N309_01526	N309_11284	A0A099ZH27	A0A099YY79	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.999
N309_01526	N309_14896	A0A099ZH27	A0A099ZS03	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.999
N309_02358	N309_01526	A0A099ZJP2	A0A099ZH27	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
N309_02358	N309_03099	A0A099ZJP2	A0A099Z231	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	Uncharacterized protein.	0.999
N309_02358	N309_05056	A0A099ZJP2	A0A099YYL4	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	Uncharacterized protein.	0.999
N309_02358	N309_06064	A0A099ZJP2	A0A099Z6J8	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	60S ribosomal protein L35.	0.999
N309_02358	N309_07568	A0A099ZJP2	A0A099ZBN8	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	60S ribosomal protein L5.	0.999
N309_02358	N309_07742	A0A099ZJP2	A0A099ZNG1	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	Uncharacterized protein.	0.999
N309_02358	N309_07994	A0A099ZJP2	A0A099YZZ9	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.999
N309_02358	N309_10530	A0A099ZJP2	A0A099Z8X0	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	Uncharacterized protein.	0.999
N309_02358	N309_11284	A0A099ZJP2	A0A099YY79	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.999
N309_02358	N309_14896	A0A099ZJP2	A0A099ZS03	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	Uncharacterized protein.	0.999