86 items (Tinamus guttatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N309_06234	Beclin 1-associated autophagy-related key regulator. (421 aa)
	N309_15240	Enkurin. (231 aa)
	N309_06528	ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. (181 aa)
	N309_05366	Protein MAATS1. (550 aa)
	N309_14689	WD repeat-containing and planar cell polarity effector protein fritz. (455 aa)
	N309_02429	RIB43A-like with coiled-coils protein 2. (358 aa)
	N309_07630	Centromere protein F. (187 aa)
	N309_13992	Coiled-coil domain-containing protein 63. (484 aa)
	N309_09572	Dynein intermediate chain 2, axonemal. (455 aa)
	N309_04928	Tetratricopeptide repeat protein 30B. (466 aa)
	N309_07454	Dynein assembly factor 1, axonemal. (252 aa)
	N309_06838	WD repeat-containing protein 96. (118 aa)
	N309_07628	Centromere protein F. (1538 aa)
	N309_04955	Uncharacterized protein. (957 aa)
	N309_14180	EF-hand domain-containing family member C2. (701 aa)
	N309_10406	Adenylate kinase 8. (92 aa)
	N309_03086	WD repeat-containing protein 63. (813 aa)
	N309_04126	Protein FAM154B. (448 aa)
	N309_05858	Kinesin-like KIF17; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (88 aa)
	N309_07080	Tektin-1. (406 aa)
	N309_07184	EF-hand domain-containing family member B. (563 aa)
	N309_15479	Oxygen-regulated protein 1. (1267 aa)
	N309_12521	Dynein heavy chain 9, axonemal. (2698 aa)
	N309_08117	cAMP-dependent protein kinase type I-alpha regulatory subunit. (380 aa)
	N309_09230	Neuronal migration protein doublecortin. (351 aa)
	N309_06837	WD repeat-containing protein 96. (958 aa)
	N309_09710	Dynein regulatory complex protein 1. (688 aa)
	N309_06140	Coiled-coil domain-containing protein 103. (200 aa)
	N309_05857	Kinesin-like KIF17. (162 aa)
	N309_12089	Thioredoxin domain-containing protein 3. (79 aa)
	N309_09760	UPF0468 protein C16orf80. (165 aa)
	N309_09874	Sjoegren syndrome nuclear autoantigen 1. (112 aa)
	N309_05517	Dynein heavy chain 5, axonemal. (4609 aa)
	N309_10734	Coiled-coil domain-containing protein 104. (141 aa)
	N309_12921	Radial spoke head protein 4 A. (524 aa)
	N309_07029	Dynein heavy chain 7, axonemal. (3836 aa)
	N309_13253	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
	N309_13070	Microtubule-associated protein. (101 aa)
	N309_07536	Cytoplasmic dynein 2 heavy chain 1. (670 aa)
	N309_01921	Protein CASC1. (619 aa)
	N309_10917	Tetratricopeptide repeat protein 25. (536 aa)
	N309_05171	Radial spoke head protein 9. (241 aa)
	N309_04086	WD repeat-containing protein 35. (1162 aa)
	N309_13045	Uncharacterized protein. (464 aa)
	N309_15386	Dynein heavy chain 8, axonemal. (4130 aa)
	N309_15326	Tektin-3. (490 aa)
	N309_08362	Protein FAM166B. (262 aa)
	N309_03296	Nucleoside diphosphate kinase 7; Belongs to the NDK family. (367 aa)
	N309_06854	Lebercilin-like. (534 aa)
	N309_07149	Sperm-associated antigen 16 protein. (226 aa)
	N309_01644	EF-hand domain-containing protein 1. (601 aa)
	N309_08014	Uncharacterized protein C1orf158. (224 aa)
	N309_11615	Tektin-4. (309 aa)
	N309_09929	UPF0691 protein C9orf116. (111 aa)
	N309_00633	Intraflagellar transport protein 57. (361 aa)
	N309_12357	Serine/threonine-protein kinase DCLK1. (247 aa)
	N309_05231	UPF0704 protein C6orf165. (622 aa)
	N309_00946	72 kDa inositol polyphosphate 5-phosphatase. (300 aa)
	N309_10978	Tektin-2. (409 aa)
	N309_11280	Cytoplasmic dynein 2 light intermediate chain 1. (342 aa)
	N309_12257	Bardet-Biedl syndrome 7 protein. (704 aa)
	N309_14341	Parkin coregulated gene protein. (156 aa)
	N309_05760	Hydrocephalus-inducing protein. (4988 aa)
	N309_07001	Dynein heavy chain 1, axonemal. (3499 aa)
	N309_04555	Uncharacterized protein KIAA1751. (315 aa)
	N309_00951	Growth arrest-specific protein 8. (311 aa)
	N309_11168	Uncharacterized protein. (1196 aa)
	N309_15501	Retinitis pigmentosa 1-like 1 protein. (179 aa)
	N309_05920	Brefeldin A-inhibited guanine nucleotide-exchange protein 2. (939 aa)
	N309_01945	A-kinase anchor protein 14. (129 aa)
	N309_05100	WD repeat-containing protein 16. (610 aa)
	N309_10038	WD repeat-containing protein 78. (705 aa)
	N309_13855	Coiled-coil domain-containing protein 40. (912 aa)
	N309_00122	Centromere protein F. (66 aa)
	N309_13836	ADP-ribosylation factor-like 13B. (349 aa)
	N309_10312	Coiled-coil domain-containing protein 173. (462 aa)
	N309_09763	Coiled-coil domain-containing protein 113. (291 aa)
	N309_00930	PACRG-like. (222 aa)
	N309_05696	Sperm-associated antigen 6. (447 aa)
	N309_11523	Sperm-associated antigen 17. (161 aa)
	N309_00422	Uncharacterized protein C15orf26. (263 aa)
	N309_06787	TRAF3-interacting protein 1. (622 aa)
	N309_13466	Dynein heavy chain 9, axonemal. (365 aa)
	N309_09727	Centriole, cilia and spindle-associated protein. (151 aa)
	N309_05317	Lebercilin. (414 aa)
	N309_13426	Protein fantom. (1274 aa)

Your Current Organism:

Tinamus guttatus

NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N309_00122	N309_05857	A0A099ZVD1	A0A099YQP0	Centromere protein F.	Kinesin-like KIF17.	0.719
N309_00122	N309_05858	A0A099ZVD1	A0A099YVM6	Centromere protein F.	Kinesin-like KIF17; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.719
N309_00122	N309_07628	A0A099ZVD1	A0A099YYS9	Centromere protein F.	Centromere protein F.	0.607
N309_00122	N309_07630	A0A099ZVD1	A0A099YZT9	Centromere protein F.	Centromere protein F.	0.527
N309_00422	N309_00930	A0A099Z5F2	A0A099Z7E7	Uncharacterized protein C15orf26.	PACRG-like.	0.428
N309_00422	N309_01644	A0A099Z5F2	A0A099ZLL1	Uncharacterized protein C15orf26.	EF-hand domain-containing protein 1.	0.676
N309_00422	N309_02429	A0A099Z5F2	A0A099YZZ0	Uncharacterized protein C15orf26.	RIB43A-like with coiled-coils protein 2.	0.592
N309_00422	N309_03296	A0A099Z5F2	A0A099ZKY7	Uncharacterized protein C15orf26.	Nucleoside diphosphate kinase 7; Belongs to the NDK family.	0.595
N309_00422	N309_04126	A0A099Z5F2	A0A099YVP1	Uncharacterized protein C15orf26.	Protein FAM154B.	0.654
N309_00422	N309_05100	A0A099Z5F2	A0A099YQN6	Uncharacterized protein C15orf26.	WD repeat-containing protein 16.	0.802
N309_00422	N309_07080	A0A099Z5F2	A0A099YVH2	Uncharacterized protein C15orf26.	Tektin-1.	0.643
N309_00422	N309_07184	A0A099Z5F2	A0A099YVB2	Uncharacterized protein C15orf26.	EF-hand domain-containing family member B.	0.595
N309_00422	N309_08362	A0A099Z5F2	A0A099ZK03	Uncharacterized protein C15orf26.	Protein FAM166B.	0.611
N309_00422	N309_09760	A0A099Z5F2	A0A099ZBP3	Uncharacterized protein C15orf26.	UPF0468 protein C16orf80.	0.595
N309_00422	N309_10312	A0A099Z5F2	A0A099Z9P6	Uncharacterized protein C15orf26.	Coiled-coil domain-containing protein 173.	0.597
N309_00422	N309_10978	A0A099Z5F2	A0A099ZPJ8	Uncharacterized protein C15orf26.	Tektin-2.	0.614
N309_00422	N309_11615	A0A099Z5F2	A0A099ZLU6	Uncharacterized protein C15orf26.	Tektin-4.	0.604
N309_00422	N309_14180	A0A099Z5F2	A0A099YYC2	Uncharacterized protein C15orf26.	EF-hand domain-containing family member C2.	0.744
N309_00422	N309_14341	A0A099Z5F2	A0A099ZSU5	Uncharacterized protein C15orf26.	Parkin coregulated gene protein.	0.595
N309_00422	N309_15240	A0A099Z5F2	A0A099Z2B1	Uncharacterized protein C15orf26.	Enkurin.	0.687