17 items (Tinamus guttatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N309_04601	Calmin. (310 aa)
	N309_04128	Lamin-L(III); Belongs to the intermediate filament family. (469 aa)
	N309_05097	Netrin-1. (156 aa)
	N309_13227	Lamin-B2; Belongs to the intermediate filament family. (533 aa)
	N309_07954	Transmembrane protein 201. (635 aa)
	N309_13011	SUN domain-containing protein 3. (160 aa)
	N309_13349	Nesprin-1. (8744 aa)
	N309_02986	Nesprin-3. (778 aa)
	N309_00438	SUN domain-containing protein 2. (682 aa)
	PAFAH1B1	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
	N309_14235	Lamin-B1; Belongs to the intermediate filament family. (457 aa)
	N309_08967	SUN domain-containing protein 1. (873 aa)
	N309_01149	F-box/WD repeat-containing protein 11. (552 aa)
	N309_00849	Centrosomal protein of 120 kDa. (975 aa)
	N309_11878	Dynactin subunit 1. (116 aa)
	N309_13559	Protein FAM193A. (1215 aa)
	N309_15712	Protein FAM193B. (503 aa)

Your Current Organism:

Tinamus guttatus

NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N309_00438	N309_01149	A0A099ZH05	A0A099ZUA4	SUN domain-containing protein 2.	F-box/WD repeat-containing protein 11.	0.407
N309_00438	N309_02986	A0A099ZH05	A0A099ZGD3	SUN domain-containing protein 2.	Nesprin-3.	0.800
N309_00438	N309_04128	A0A099ZH05	A0A099YTD9	SUN domain-containing protein 2.	Lamin-L(III); Belongs to the intermediate filament family.	0.578
N309_00438	N309_07954	A0A099ZH05	A0A099YZY1	SUN domain-containing protein 2.	Transmembrane protein 201.	0.439
N309_00438	N309_08967	A0A099ZH05	A0A099YVU2	SUN domain-containing protein 2.	SUN domain-containing protein 1.	0.805
N309_00438	N309_13227	A0A099ZH05	A0A099YZK2	SUN domain-containing protein 2.	Lamin-B2; Belongs to the intermediate filament family.	0.690
N309_00438	N309_13349	A0A099ZH05	A0A099Z6D9	SUN domain-containing protein 2.	Nesprin-1.	0.925
N309_00438	N309_14235	A0A099ZH05	A0A099ZM48	SUN domain-containing protein 2.	Lamin-B1; Belongs to the intermediate filament family.	0.690
N309_00849	N309_08967	A0A099YX36	A0A099YVU2	Centrosomal protein of 120 kDa.	SUN domain-containing protein 1.	0.400
N309_01149	N309_00438	A0A099ZUA4	A0A099ZH05	F-box/WD repeat-containing protein 11.	SUN domain-containing protein 2.	0.407
N309_01149	N309_13011	A0A099ZUA4	A0A099Z5S4	F-box/WD repeat-containing protein 11.	SUN domain-containing protein 3.	0.407
N309_02986	N309_00438	A0A099ZGD3	A0A099ZH05	Nesprin-3.	SUN domain-containing protein 2.	0.800
N309_02986	N309_08967	A0A099ZGD3	A0A099YVU2	Nesprin-3.	SUN domain-containing protein 1.	0.717
N309_02986	N309_13011	A0A099ZGD3	A0A099Z5S4	Nesprin-3.	SUN domain-containing protein 3.	0.800
N309_04128	N309_00438	A0A099YTD9	A0A099ZH05	Lamin-L(III); Belongs to the intermediate filament family.	SUN domain-containing protein 2.	0.578
N309_04128	N309_08967	A0A099YTD9	A0A099YVU2	Lamin-L(III); Belongs to the intermediate filament family.	SUN domain-containing protein 1.	0.578
N309_04128	N309_13011	A0A099YTD9	A0A099Z5S4	Lamin-L(III); Belongs to the intermediate filament family.	SUN domain-containing protein 3.	0.578
N309_04128	N309_13227	A0A099YTD9	A0A099YZK2	Lamin-L(III); Belongs to the intermediate filament family.	Lamin-B2; Belongs to the intermediate filament family.	0.818
N309_04128	N309_13349	A0A099YTD9	A0A099Z6D9	Lamin-L(III); Belongs to the intermediate filament family.	Nesprin-1.	0.609
N309_04128	N309_14235	A0A099YTD9	A0A099ZM48	Lamin-L(III); Belongs to the intermediate filament family.	Lamin-B1; Belongs to the intermediate filament family.	0.818