STRINGSTRING
N309_05782 N309_05782 N309_12993 N309_12993 N309_10363 N309_10363 N309_10396 N309_10396 N309_04047 N309_04047 N309_08484 N309_08484 N309_07235 N309_07235 N309_01913 N309_01913 N309_13293 N309_13293 N309_02568 N309_02568 N309_11557 N309_11557 N309_02317 N309_02317
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N309_05782Retinoschisin. (198 aa)
N309_12993Phosphodiesterase. (838 aa)
N309_10363Opsin-3; Belongs to the G-protein coupled receptor 1 family. (184 aa)
N309_10396Visual pigment-like receptor peropsin; Belongs to the G-protein coupled receptor 1 family. (331 aa)
N309_04047RPE-retinal G protein-coupled receptor; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. (269 aa)
N309_08484Melanopsin. (400 aa)
N309_07235Rhodopsin. (355 aa)
N309_01913Melanopsin. (342 aa)
N309_13293Opsin-5; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. (303 aa)
N309_02568Visual pigment-like receptor peropsin; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. (208 aa)
N309_11557Rhodopsin. (350 aa)
N309_02317Pinopsin; Belongs to the G-protein coupled receptor 1 family. (189 aa)
Your Current Organism:
Tinamus guttatus
NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou
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