(44 nodes) Chromosome localization network (Tinamus guttatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N309_01038	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (852 aa)
	N309_13287	Centromere protein Q. (214 aa)
	N309_08967	SUN domain-containing protein 1. (873 aa)
	N309_12000	DNA replication factor Cdt1. (285 aa)
	N309_05068	Vacuolar protein sorting-associated protein 4B. (149 aa)
	N309_07628	Centromere protein F. (1538 aa)
	N309_00822	Vacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family. (121 aa)
	N309_07630	Centromere protein F. (187 aa)
	N309_03625	Uncharacterized protein C17orf104. (605 aa)
	N309_04634	Meiotic recombination protein SPO11. (353 aa)
	N309_05067	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family. (180 aa)
	N309_00790	Inner centromere protein. (351 aa)
	N309_08896	Nuclear migration protein nudC. (310 aa)
	N309_00732	Vacuolar protein sorting-associated protein 4A. (107 aa)
	N309_11488	Kinetochore protein Nuf2. (376 aa)
	N309_13112	Charged multivesicular body protein 3. (210 aa)
	N309_06770	Microtubule-associated protein RP/EB family member 1. (263 aa)
	N309_09750	Importin subunit beta-1. (759 aa)
	N309_09621	Intermediate filament family orphan 2; Belongs to the intermediate filament family. (346 aa)
	N309_02786	Centromere protein C. (568 aa)
	N309_15374	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (378 aa)
	N309_03060	Centromere/kinetochore protein zw10. (735 aa)
	N309_10895	Charged multivesicular body protein 5. (197 aa)
	N309_05218	Cell division cycle protein 23. (520 aa)
	N309_12637	Nuclear distribution protein nudE 1. (344 aa)
	N309_08970	Cullin-3; Belongs to the cullin family. (547 aa)
	N309_08222	Mitotic spindle assembly checkpoint protein MAD1. (665 aa)
	N309_04832	Regulator of microtubule dynamics protein 1. (199 aa)
	N309_09280	Progesterone-induced-blocking factor 1. (544 aa)
	N309_01743	Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (382 aa)
	N309_10147	Inner centromere protein. (362 aa)
	N309_03640	Kinetochore protein NDC80. (640 aa)
	N309_14231	DNA mismatch repair protein Mlh1. (727 aa)
	N309_07019	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (716 aa)
	N309_02840	Protein FAM83D. (369 aa)
	N309_08973	GTP-binding protein GEM. (297 aa)
	N309_13256	Nuclear distribution protein nudE-like 1. (323 aa)
	N309_14561	Protein MIS12. (209 aa)
	N309_04947	Coiled-coil domain-containing protein 79. (385 aa)
	N309_11904	Uncharacterized protein C17orf104. (249 aa)
	N309_11959	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (863 aa)
	N309_00114	Coiled-coil domain-containing protein 79. (42 aa)
	N309_00122	Centromere protein F. (66 aa)
	N309_00142	Centromere protein Q. (151 aa)

Your Current Organism:

Tinamus guttatus

NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N309_00122	N309_01038	A0A099ZVD1	A0A099ZBS2	Centromere protein F.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.724
N309_00122	N309_03640	A0A099ZVD1	A0A099ZLD1	Centromere protein F.	Kinetochore protein NDC80.	0.775
N309_00122	N309_07019	A0A099ZVD1	A0A099ZMG0	Centromere protein F.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.794
N309_00122	N309_07628	A0A099ZVD1	A0A099YYS9	Centromere protein F.	Centromere protein F.	0.607
N309_00122	N309_07630	A0A099ZVD1	A0A099YZT9	Centromere protein F.	Centromere protein F.	0.527
N309_00122	N309_11488	A0A099ZVD1	A0A099Z3S1	Centromere protein F.	Kinetochore protein Nuf2.	0.770
N309_00122	N309_11959	A0A099ZVD1	A0A099ZT77	Centromere protein F.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.480
N309_00122	N309_12637	A0A099ZVD1	A0A099ZC43	Centromere protein F.	Nuclear distribution protein nudE 1.	0.448
N309_00122	N309_13256	A0A099ZVD1	A0A099ZN17	Centromere protein F.	Nuclear distribution protein nudE-like 1.	0.407
N309_00142	N309_02786	A0A099ZVF1	A0A099Z7H1	Centromere protein Q.	Centromere protein C.	0.681
N309_00142	N309_08896	A0A099ZVF1	A0A099Z1X5	Centromere protein Q.	Nuclear migration protein nudC.	0.552
N309_00732	N309_00822	A0A099Z261	A0A099YZN9	Vacuolar protein sorting-associated protein 4A.	Vacuolar protein sorting-associated protein 4A; Belongs to the AAA ATPase family.	0.899
N309_00732	N309_05067	A0A099Z261	A0A099Z166	Vacuolar protein sorting-associated protein 4A.	Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.	0.928
N309_00732	N309_10895	A0A099Z261	A0A099ZBN7	Vacuolar protein sorting-associated protein 4A.	Charged multivesicular body protein 5.	0.860
N309_00732	N309_13112	A0A099Z261	A0A099Z4N2	Vacuolar protein sorting-associated protein 4A.	Charged multivesicular body protein 3.	0.874
N309_00790	N309_01743	A0A099Z1B7	A0A099ZJV7	Inner centromere protein.	Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.	0.571
N309_00790	N309_03640	A0A099Z1B7	A0A099ZLD1	Inner centromere protein.	Kinetochore protein NDC80.	0.625
N309_00790	N309_07019	A0A099Z1B7	A0A099ZMG0	Inner centromere protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.535
N309_00790	N309_08896	A0A099Z1B7	A0A099Z1X5	Inner centromere protein.	Nuclear migration protein nudC.	0.672
N309_00790	N309_11488	A0A099Z1B7	A0A099Z3S1	Inner centromere protein.	Kinetochore protein Nuf2.	0.467