(22 nodes) Defense response to Gram-positive bacterium network (Tinamus guttatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N309_10751	Receptor-interacting serine/threonine-protein kinase 2. (510 aa)
	N309_01865	Myeloid differentiation primary response protein MyD88. (188 aa)
	N309_03605	High mobility group protein B2. (207 aa)
	N309_01648	Interleukin-17F. (159 aa)
	N309_02756	Tumor necrosis factor ligand superfamily member 8; Belongs to the tumor necrosis factor family. (233 aa)
	N309_02962	Receptor-interacting serine/threonine-protein kinase 2. (201 aa)
	N309_11913	Lysozyme g. (159 aa)
	N309_01647	Interleukin-17F. (160 aa)
	N309_15037	Disintegrin and metalloproteinase domain-containing protein 17. (792 aa)
	N309_11912	Lysozyme g. (209 aa)
	N309_00943	Caspase recruitment domain-containing protein 9. (548 aa)
	N309_03841	Ribonuclease 3. (819 aa)
	N309_01743	Nucleoporin SEH1; Belongs to the WD repeat SEC13 family. (382 aa)
	N309_09844	Interleukin-18. (194 aa)
	N309_12712	SERPIN domain-containing protein; Belongs to the serpin family. (232 aa)
	N309_12313	Ephrin type-A receptor 2. (213 aa)
	N309_14659	Reactive oxygen species modulator 1. (79 aa)
	N309_06238	Nucleotide-binding oligomerization domain-containing protein 1. (856 aa)
	N309_11867	Gallinacin-13. (60 aa)
	N309_07373	Lysozyme; Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Belongs to the glycosyl hydrolase 22 family. (147 aa)
	N309_08243	Gallinacin-10. (64 aa)
	N309_02933	Interleukin-17D. (90 aa)

Your Current Organism:

Tinamus guttatus

NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N309_00943	N309_01865	A0A099ZLP1	A0A099ZUY9	Caspase recruitment domain-containing protein 9.	Myeloid differentiation primary response protein MyD88.	0.499
N309_00943	N309_02962	A0A099ZLP1	A0A099ZPM8	Caspase recruitment domain-containing protein 9.	Receptor-interacting serine/threonine-protein kinase 2.	0.829
N309_00943	N309_06238	A0A099ZLP1	A0A099Z3M2	Caspase recruitment domain-containing protein 9.	Nucleotide-binding oligomerization domain-containing protein 1.	0.641
N309_00943	N309_10751	A0A099ZLP1	A0A099Z7D5	Caspase recruitment domain-containing protein 9.	Receptor-interacting serine/threonine-protein kinase 2.	0.829
N309_01647	N309_01648	A0A099ZNE9	A0A099ZQZ8	Interleukin-17F.	Interleukin-17F.	0.973
N309_01648	N309_01647	A0A099ZQZ8	A0A099ZNE9	Interleukin-17F.	Interleukin-17F.	0.973
N309_01648	N309_01865	A0A099ZQZ8	A0A099ZUY9	Interleukin-17F.	Myeloid differentiation primary response protein MyD88.	0.420
N309_01648	N309_09844	A0A099ZQZ8	A0A099ZIE8	Interleukin-17F.	Interleukin-18.	0.419
N309_01865	N309_00943	A0A099ZUY9	A0A099ZLP1	Myeloid differentiation primary response protein MyD88.	Caspase recruitment domain-containing protein 9.	0.499
N309_01865	N309_01648	A0A099ZUY9	A0A099ZQZ8	Myeloid differentiation primary response protein MyD88.	Interleukin-17F.	0.420
N309_01865	N309_02962	A0A099ZUY9	A0A099ZPM8	Myeloid differentiation primary response protein MyD88.	Receptor-interacting serine/threonine-protein kinase 2.	0.752
N309_01865	N309_03605	A0A099ZUY9	A0A099ZTC3	Myeloid differentiation primary response protein MyD88.	High mobility group protein B2.	0.409
N309_01865	N309_06238	A0A099ZUY9	A0A099Z3M2	Myeloid differentiation primary response protein MyD88.	Nucleotide-binding oligomerization domain-containing protein 1.	0.535
N309_01865	N309_09844	A0A099ZUY9	A0A099ZIE8	Myeloid differentiation primary response protein MyD88.	Interleukin-18.	0.569
N309_01865	N309_10751	A0A099ZUY9	A0A099Z7D5	Myeloid differentiation primary response protein MyD88.	Receptor-interacting serine/threonine-protein kinase 2.	0.752
N309_02962	N309_00943	A0A099ZPM8	A0A099ZLP1	Receptor-interacting serine/threonine-protein kinase 2.	Caspase recruitment domain-containing protein 9.	0.829
N309_02962	N309_01865	A0A099ZPM8	A0A099ZUY9	Receptor-interacting serine/threonine-protein kinase 2.	Myeloid differentiation primary response protein MyD88.	0.752
N309_02962	N309_06238	A0A099ZPM8	A0A099Z3M2	Receptor-interacting serine/threonine-protein kinase 2.	Nucleotide-binding oligomerization domain-containing protein 1.	0.942
N309_03605	N309_01865	A0A099ZTC3	A0A099ZUY9	High mobility group protein B2.	Myeloid differentiation primary response protein MyD88.	0.409
N309_06238	N309_00943	A0A099Z3M2	A0A099ZLP1	Nucleotide-binding oligomerization domain-containing protein 1.	Caspase recruitment domain-containing protein 9.	0.641