STRINGSTRING
N309_15300 N309_15300 N309_13541 N309_13541 N309_13895 N309_13895 N309_14027 N309_14027 N309_04259 N309_04259 N309_02877 N309_02877 N309_01436 N309_01436 PAFAH1B1 PAFAH1B1 N309_05650 N309_05650 N309_10111 N309_10111 N309_04963 N309_04963 N309_05095 N309_05095 N309_02032 N309_02032 N309_14040 N309_14040 N309_14847 N309_14847 N309_14545 N309_14545 N309_09673 N309_09673 N309_04696 N309_04696 N309_01394 N309_01394 N309_05515 N309_05515 N309_03695 N309_03695
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N309_15300Alanine--tRNA ligase, cytoplasmic. (965 aa)
N309_13541RE1-silencing transcription factor. (643 aa)
N309_13895SH3 and multiple ankyrin repeat domains protein 3. (995 aa)
N309_14027Clarin-1. (138 aa)
N309_04259SH3 and multiple ankyrin repeat domains protein 3. (146 aa)
N309_02877Tripeptidyl-peptidase 1. (333 aa)
N309_01436Usher syndrome type-1G protein. (469 aa)
PAFAH1B1Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
N309_05650Leucine-rich repeat-containing protein 45. (597 aa)
N309_10111Biogenesis of lysosome-related organelles complex 1 subunit 4. (136 aa)
N309_04963Tyrosine-protein kinase. (1015 aa)
N309_05095Neurofilament light polypeptide; Belongs to the intermediate filament family. (156 aa)
N309_02032Phosphatidylinositol phosphatase PTPRQ. (1930 aa)
N309_14040Beta-hexosaminidase subunit beta. (369 aa)
N309_14847Beta-hexosaminidase subunit alpha. (417 aa)
N309_14545Amino acid transporter. (543 aa)
N309_09673Ganglioside GM2 activator. (148 aa)
N309_04696Amyloid beta A4 protein. (756 aa)
N309_01394Aldehyde dehydrogenase family 1 member A3; Belongs to the aldehyde dehydrogenase family. (479 aa)
N309_05515Amino acid transporter. (543 aa)
N309_03695RNA binding protein fox-1 1. (389 aa)
Your Current Organism:
Tinamus guttatus
NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou
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