(18 nodes) Microtubule plus-end binding network (Tinamus guttatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N309_05961	CAP-Gly domain-containing linker protein 1. (1437 aa)
	N309_10014	CAP-Gly domain-containing linker protein 4. (697 aa)
	N309_06770	Microtubule-associated protein RP/EB family member 1. (263 aa)
	N309_15045	Stromal interaction molecule 1. (389 aa)
	N309_09270	CAP-Gly domain-containing linker protein 2. (980 aa)
	N309_04193	Microtubule-associated protein RP/EB family member 2. (164 aa)
	PAFAH1B1	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
	N309_07019	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (716 aa)
	N309_06885	CLIP-associating protein 1. (1472 aa)
	N309_06396	CLIP-associating protein 2. (952 aa)
	N309_07399	Small kinetochore-associated protein. (253 aa)
	N309_11959	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (863 aa)
	N309_01149	F-box/WD repeat-containing protein 11. (552 aa)
	N309_00061	CAP-Gly domain-containing linker protein 1. (184 aa)
	N309_15712	Protein FAM193B. (503 aa)
	N309_13559	Protein FAM193A. (1215 aa)
	N309_11878	Dynactin subunit 1. (116 aa)
	N309_06265	Cytoskeleton-associated protein 5. (2036 aa)

Your Current Organism:

Tinamus guttatus

NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N309_00061	N309_04193	A0A099ZV00	A0A099ZKK9	CAP-Gly domain-containing linker protein 1.	Microtubule-associated protein RP/EB family member 2.	0.637
N309_00061	N309_06265	A0A099ZV00	A0A099ZW01	CAP-Gly domain-containing linker protein 1.	Cytoskeleton-associated protein 5.	0.538
N309_00061	N309_06396	A0A099ZV00	A0A099YVX7	CAP-Gly domain-containing linker protein 1.	CLIP-associating protein 2.	0.624
N309_00061	N309_06770	A0A099ZV00	A0A099Z4P6	CAP-Gly domain-containing linker protein 1.	Microtubule-associated protein RP/EB family member 1.	0.731
N309_00061	N309_06885	A0A099ZV00	A0A099ZN25	CAP-Gly domain-containing linker protein 1.	CLIP-associating protein 1.	0.608
N309_00061	N309_11878	A0A099ZV00	A0A099YX53	CAP-Gly domain-containing linker protein 1.	Dynactin subunit 1.	0.919
N309_00061	N309_11959	A0A099ZV00	A0A099ZT77	CAP-Gly domain-containing linker protein 1.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.481
N309_00061	PAFAH1B1	A0A099ZV00	A0A099ZM26	CAP-Gly domain-containing linker protein 1.	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.	0.508
N309_04193	N309_00061	A0A099ZKK9	A0A099ZV00	Microtubule-associated protein RP/EB family member 2.	CAP-Gly domain-containing linker protein 1.	0.637
N309_04193	N309_05961	A0A099ZKK9	A0A099ZND7	Microtubule-associated protein RP/EB family member 2.	CAP-Gly domain-containing linker protein 1.	0.637
N309_04193	N309_06265	A0A099ZKK9	A0A099ZW01	Microtubule-associated protein RP/EB family member 2.	Cytoskeleton-associated protein 5.	0.932
N309_04193	N309_06396	A0A099ZKK9	A0A099YVX7	Microtubule-associated protein RP/EB family member 2.	CLIP-associating protein 2.	0.536
N309_04193	N309_06770	A0A099ZKK9	A0A099Z4P6	Microtubule-associated protein RP/EB family member 2.	Microtubule-associated protein RP/EB family member 1.	0.887
N309_04193	N309_06885	A0A099ZKK9	A0A099ZN25	Microtubule-associated protein RP/EB family member 2.	CLIP-associating protein 1.	0.536
N309_04193	N309_07019	A0A099ZKK9	A0A099ZMG0	Microtubule-associated protein RP/EB family member 2.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.437
N309_04193	N309_07399	A0A099ZKK9	A0A099YWS4	Microtubule-associated protein RP/EB family member 2.	Small kinetochore-associated protein.	0.405
N309_04193	N309_09270	A0A099ZKK9	A0A099ZGH7	Microtubule-associated protein RP/EB family member 2.	CAP-Gly domain-containing linker protein 2.	0.636
N309_04193	N309_10014	A0A099ZKK9	A0A099Z0M7	Microtubule-associated protein RP/EB family member 2.	CAP-Gly domain-containing linker protein 4.	0.603
N309_04193	N309_11878	A0A099ZKK9	A0A099YX53	Microtubule-associated protein RP/EB family member 2.	Dynactin subunit 1.	0.813
N309_04193	N309_11959	A0A099ZKK9	A0A099ZT77	Microtubule-associated protein RP/EB family member 2.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.693