28 items (Tinamus guttatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N309_13349	Nesprin-1. (8744 aa)
	N309_13011	SUN domain-containing protein 3. (160 aa)
	N309_09446	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (162 aa)
	N309_10216	Partitioning defective 3. (59 aa)
	N309_09014	TBCC domain-containing protein 1. (445 aa)
	N309_01246	Mitotic spindle assembly checkpoint protein MAD2A. (181 aa)
	N309_09445	E3 SUMO-protein ligase RanBP2. (155 aa)
	N309_15629	Uncharacterized protein C9orf114. (348 aa)
	N309_00415	Mitotic interactor and substrate of PLK1. (600 aa)
	N309_08967	SUN domain-containing protein 1. (873 aa)
	N309_00486	Partitioning defective 3 B. (280 aa)
	N309_00484	Partitioning defective 3 B. (98 aa)
	N309_00487	Partitioning defective 3 B. (58 aa)
	N309_00483	Partitioning defective 3 B. (124 aa)
	N309_00485	Partitioning defective 3 B. (148 aa)
	N309_04096	Ninein-like. (98 aa)
	N309_07088	TALPID3 protein. (258 aa)
	N309_13256	Nuclear distribution protein nudE-like 1. (323 aa)
	PAFAH1B1	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
	N309_02732	Partitioning defective 3. (1114 aa)
	N309_13024	Ezrin. (582 aa)
	N309_00240	Cytosolic Fe-S cluster assembly factor nubp1-B. (233 aa)
	N309_00438	SUN domain-containing protein 2. (682 aa)
	N309_04949	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (457 aa)
	N309_13283	Intraflagellar transport protein 20 B. (93 aa)
	N309_09645	Protein asunder. (706 aa)
	N309_12637	Nuclear distribution protein nudE 1. (344 aa)
	N309_01033	G-protein-signaling modulator 2. (634 aa)

Your Current Organism:

Tinamus guttatus

NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N309_00438	N309_08967	A0A099ZH05	A0A099YVU2	SUN domain-containing protein 2.	SUN domain-containing protein 1.	0.805
N309_00438	N309_13349	A0A099ZH05	A0A099Z6D9	SUN domain-containing protein 2.	Nesprin-1.	0.925
N309_00483	N309_00484	A0A099YS55	A0A099YT93	Partitioning defective 3 B.	Partitioning defective 3 B.	0.912
N309_00483	N309_00485	A0A099YS55	A0A099YPJ5	Partitioning defective 3 B.	Partitioning defective 3 B.	0.536
N309_00483	N309_00486	A0A099YS55	A0A099YUH6	Partitioning defective 3 B.	Partitioning defective 3 B.	0.445
N309_00484	N309_00483	A0A099YT93	A0A099YS55	Partitioning defective 3 B.	Partitioning defective 3 B.	0.912
N309_00484	N309_00485	A0A099YT93	A0A099YPJ5	Partitioning defective 3 B.	Partitioning defective 3 B.	0.550
N309_00484	N309_00486	A0A099YT93	A0A099YUH6	Partitioning defective 3 B.	Partitioning defective 3 B.	0.457
N309_00485	N309_00483	A0A099YPJ5	A0A099YS55	Partitioning defective 3 B.	Partitioning defective 3 B.	0.536
N309_00485	N309_00484	A0A099YPJ5	A0A099YT93	Partitioning defective 3 B.	Partitioning defective 3 B.	0.550
N309_00485	N309_00486	A0A099YPJ5	A0A099YUH6	Partitioning defective 3 B.	Partitioning defective 3 B.	0.900
N309_00486	N309_00483	A0A099YUH6	A0A099YS55	Partitioning defective 3 B.	Partitioning defective 3 B.	0.445
N309_00486	N309_00484	A0A099YUH6	A0A099YT93	Partitioning defective 3 B.	Partitioning defective 3 B.	0.457
N309_00486	N309_00485	A0A099YUH6	A0A099YPJ5	Partitioning defective 3 B.	Partitioning defective 3 B.	0.900
N309_01246	N309_04949	A0A099Z326	A0A099ZR09	Mitotic spindle assembly checkpoint protein MAD2A.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.624
N309_01246	N309_09445	A0A099Z326	A0A099YZA6	Mitotic spindle assembly checkpoint protein MAD2A.	E3 SUMO-protein ligase RanBP2.	0.979
N309_01246	N309_09446	A0A099Z326	A0A099Z404	Mitotic spindle assembly checkpoint protein MAD2A.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.979
N309_01246	N309_12637	A0A099Z326	A0A099ZC43	Mitotic spindle assembly checkpoint protein MAD2A.	Nuclear distribution protein nudE 1.	0.594
N309_01246	N309_13256	A0A099Z326	A0A099ZN17	Mitotic spindle assembly checkpoint protein MAD2A.	Nuclear distribution protein nudE-like 1.	0.594
N309_02732	N309_10216	A0A099ZQH7	A0A099Z403	Partitioning defective 3.	Partitioning defective 3.	0.458