(17 nodes) Dynein complex binding network (Tinamus guttatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N309_04627	ATM interactor. (713 aa)
	N309_05023	NDK domain-containing protein. (271 aa)
	N309_05263	Uncharacterized protein. (213 aa)
	N309_05024	Uncharacterized protein. (183 aa)
	N309_09829	Fragile X mental retardation protein 1 B. (551 aa)
	N309_10188	Protein phosphatase 1 regulatory subunit 42. (255 aa)
	N309_03145	Nucleoprotein TPR. (2366 aa)
	N309_01033	G-protein-signaling modulator 2. (634 aa)
	N309_07630	Centromere protein F. (187 aa)
	N309_07454	Dynein assembly factor 1, axonemal. (252 aa)
	N309_07628	Centromere protein F. (1538 aa)
	N309_07013	Dynactin subunit 6. (129 aa)
	N309_00122	Centromere protein F. (66 aa)
	PAFAH1B1	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
	N309_01149	F-box/WD repeat-containing protein 11. (552 aa)
	N309_01179	Protein bicaudal D 2. (768 aa)
	N309_05630	Structural maintenance of chromosomes protein 3. (650 aa)

Your Current Organism:

Tinamus guttatus

NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N309_00122	N309_07628	A0A099ZVD1	A0A099YYS9	Centromere protein F.	Centromere protein F.	0.607
N309_00122	N309_07630	A0A099ZVD1	A0A099YZT9	Centromere protein F.	Centromere protein F.	0.527
N309_01149	N309_10188	A0A099ZUA4	A0A099ZAF4	F-box/WD repeat-containing protein 11.	Protein phosphatase 1 regulatory subunit 42.	0.430
N309_01179	N309_07013	A0A099ZMB3	A0A099YY14	Protein bicaudal D 2.	Dynactin subunit 6.	0.617
N309_01179	PAFAH1B1	A0A099ZMB3	A0A099ZM26	Protein bicaudal D 2.	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.	0.790
N309_05023	N309_05024	A0A099ZS96	A0A099ZSA2	NDK domain-containing protein.	Uncharacterized protein.	0.899
N309_05023	N309_05263	A0A099ZS96	A0A099ZTM7	NDK domain-containing protein.	Uncharacterized protein.	0.835
N309_05024	N309_05023	A0A099ZSA2	A0A099ZS96	Uncharacterized protein.	NDK domain-containing protein.	0.899
N309_05024	N309_05263	A0A099ZSA2	A0A099ZTM7	Uncharacterized protein.	Uncharacterized protein.	0.884
N309_05263	N309_05023	A0A099ZTM7	A0A099ZS96	Uncharacterized protein.	NDK domain-containing protein.	0.835
N309_05263	N309_05024	A0A099ZTM7	A0A099ZSA2	Uncharacterized protein.	Uncharacterized protein.	0.884
N309_07013	N309_01179	A0A099YY14	A0A099ZMB3	Dynactin subunit 6.	Protein bicaudal D 2.	0.617
N309_07013	PAFAH1B1	A0A099YY14	A0A099ZM26	Dynactin subunit 6.	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.	0.631
N309_07628	N309_00122	A0A099YYS9	A0A099ZVD1	Centromere protein F.	Centromere protein F.	0.607
N309_07628	N309_07630	A0A099YYS9	A0A099YZT9	Centromere protein F.	Centromere protein F.	0.921
N309_07630	N309_00122	A0A099YZT9	A0A099ZVD1	Centromere protein F.	Centromere protein F.	0.527
N309_07630	N309_07628	A0A099YZT9	A0A099YYS9	Centromere protein F.	Centromere protein F.	0.921
N309_10188	N309_01149	A0A099ZAF4	A0A099ZUA4	Protein phosphatase 1 regulatory subunit 42.	F-box/WD repeat-containing protein 11.	0.430
N309_10188	PAFAH1B1	A0A099ZAF4	A0A099ZM26	Protein phosphatase 1 regulatory subunit 42.	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.	0.498
PAFAH1B1	N309_01179	A0A099ZM26	A0A099ZMB3	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.	Protein bicaudal D 2.	0.790