94 items (Tinamus guttatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N309_10034	Polycomb protein EED. (403 aa)
	N309_00974	Nucleoporin Nup37. (326 aa)
	N309_06355	F-box/WD repeat-containing protein 1A. (593 aa)
	N309_00390	Transducin-like enhancer protein 4. (725 aa)
	N309_10233	Guanine nucleotide-binding protein subunit beta-2-like 1. (279 aa)
	N309_01149	F-box/WD repeat-containing protein 11. (552 aa)
	N309_07162	Transcription initiation factor TFIID subunit 5. (611 aa)
	N309_01322	WD repeat-containing protein 41. (438 aa)
	N309_14600	Protein TSSC1. (300 aa)
	N309_02578	Pre-mRNA-processing factor 19. (479 aa)
	N309_12940	Coronin; Belongs to the WD repeat coronin family. (516 aa)
	N309_12935	WD40 repeat-containing protein SMU1. (383 aa)
	N309_02075	POC1 centriolar protein A. (399 aa)
	N309_12820	Echinoderm microtubule-associated protein-like 5. (1893 aa)
	N309_14244	DNA excision repair protein ERCC-8. (374 aa)
	N309_09461	Gem-associated protein 5. (1400 aa)
	N309_10510	WD repeat-containing protein 5. (334 aa)
	N309_06923	POC1 centriolar protein B. (254 aa)
	N309_09968	U3 small nucleolar RNA-interacting protein 2. (331 aa)
	N309_12971	Periodic tryptophan protein 1. (388 aa)
	N309_11171	WD repeat-containing protein 53. (333 aa)
	N309_02494	Kinesin-like KIF21A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1600 aa)
	N309_08700	Peroxisomal targeting signal 2 receptor. (278 aa)
	N309_02570	Striatin. (708 aa)
	PAFAH1B1	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
	N309_08961	WD repeat-containing protein 75. (761 aa)
	N309_13039	U5 small nuclear ribonucleoprotein 40 kDa protein. (314 aa)
	N309_09812	Denticleless protein. (710 aa)
	N309_00290	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP. (1252 aa)
	N309_14044	U3 small nucleolar RNA-associated protein 15. (497 aa)
	N309_02070	Histone-binding protein RBBP7. (383 aa)
	N309_00811	Protein transport protein Sec31B. (1213 aa)
	N309_09823	PH-interacting protein. (1771 aa)
	N309_10547	Bromodomain and WD repeat-containing protein 3. (1766 aa)
	N309_12149	Notchless protein 1. (433 aa)
	N309_00212	Eukaryotic translation initiation factor 3 subunit I. (177 aa)
	N309_06069	Autophagy-related protein 16-1. (568 aa)
	N309_00364	WD repeat-containing protein 72. (1095 aa)
	N309_08179	DDB1-and CUL4-associated factor 12. (421 aa)
	N309_12841	F-box-like/WD repeat-containing protein TBL1XR1. (488 aa)
	N309_08066	Ribosome biogenesis protein WDR12. (356 aa)
	N309_08548	Transducin-like enhancer protein 1. (729 aa)
	N309_13942	Periodic tryptophan protein 2. (879 aa)
	N309_03028	WD repeat and FYVE domain-containing protein 2. (355 aa)
	N309_04370	F-box/WD repeat-containing protein 2. (454 aa)
	N309_11044	U4/U6 small nuclear ribonucleoprotein Prp4. (506 aa)
	N309_10389	F-box/WD repeat-containing protein 7. (688 aa)
	N309_05466	Nucleoporin Nup43. (335 aa)
	N309_01458	Guanine nucleotide-binding protein subunit beta-5. (393 aa)
	N309_14774	Coronin; Belongs to the WD repeat coronin family. (476 aa)
	N309_09754	Katanin p80 WD40 repeat-containing subunit B1. (658 aa)
	N309_01035	WD repeat-containing protein 47. (920 aa)
	N309_13910	WD repeat-containing protein 48. (645 aa)
	N309_06857	Bromodomain and WD repeat-containing protein 1. (1176 aa)
	N309_01005	Chromatin assembly factor 1 subunit B. (556 aa)
	N309_01839	Methylosome protein 50. (254 aa)
	N309_11524	WD repeat-containing protein 3. (934 aa)
	N309_05544	Transducin beta-like 3. (808 aa)
	N309_08520	Striatin-3. (707 aa)
	N309_04693	WD repeat-containing protein 88. (249 aa)
	N309_00722	WD repeat-containing protein 18. (318 aa)
	N309_05917	Angio-associated migratory cell protein. (343 aa)
	N309_09960	WD repeat-containing protein 90. (1735 aa)
	N309_02783	WD repeat, SAM and U-box domain-containing protein 1. (476 aa)
	N309_06167	Transducin beta-like 2. (296 aa)
	N309_11737	P21-activated protein kinase-interacting protein 1-like. (345 aa)
	N309_04633	mRNA export factor. (277 aa)
	N309_02196	WD repeat and SOCS box-containing protein 2. (368 aa)
	N309_06609	DDB1-and CUL4-associated factor 12. (407 aa)
	N309_14086	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3. (306 aa)
	N309_02415	Guanine nucleotide-binding protein subunit beta-4. (340 aa)
	N309_10525	Histone-binding protein RBBP4. (420 aa)
	N309_02773	WD repeat-containing protein 52. (879 aa)
	N309_09956	WD repeat-containing protein 24. (668 aa)
	N309_10600	Pleiotropic regulator 1. (513 aa)
	N309_06685	E3 ubiquitin-protein ligase RFWD2. (580 aa)
	N309_00393	F-box/WD repeat-containing protein 7. (159 aa)
	N309_01797	WD repeat and SOCS box-containing protein 1. (408 aa)
	N309_07113	WD repeat-containing protein 61. (292 aa)
	N309_04474	WD repeat-containing protein 59. (961 aa)
	N309_10669	U3 small nucleolar RNA-associated protein 15. (493 aa)
	N309_06864	WD repeat-containing protein 17. (1283 aa)
	N309_11124	WD repeat-containing protein 36. (840 aa)
	N309_14843	Target of rapamycin complex subunit lst8. (252 aa)
	N309_13704	Transducin-like enhancer protein 2. (729 aa)
	N309_05808	Putative E3 ubiquitin-protein ligase HERC1. (4903 aa)
	N309_15531	Cleavage stimulation factor subunit 1. (431 aa)
	N309_08920	TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L. (589 aa)
	N309_07807	WD repeat and FYVE domain-containing protein 1. (367 aa)
	N309_01363	Diphthamide biosynthesis protein 7. (411 aa)
	N309_02673	Dynein assembly factor with WDR repeat domains 1. (401 aa)
	N309_06578	F-box-like/WD repeat-containing protein TBL1X. (320 aa)
	N309_02051	Transducin-like enhancer protein 3. (702 aa)
	N309_05100	WD repeat-containing protein 16. (610 aa)

Your Current Organism:

Tinamus guttatus

NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N309_00212	N309_02196	A0A099ZIV0	A0A099Z469	Eukaryotic translation initiation factor 3 subunit I.	WD repeat and SOCS box-containing protein 2.	0.403
N309_00212	N309_10233	A0A099ZIV0	A0A099ZUC9	Eukaryotic translation initiation factor 3 subunit I.	Guanine nucleotide-binding protein subunit beta-2-like 1.	0.996
N309_00290	N309_00364	A0A099ZLV5	A0A099ZI57	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD repeat-containing protein 72.	0.592
N309_00290	N309_00722	A0A099ZLV5	A0A099Z969	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD repeat-containing protein 18.	0.463
N309_00290	N309_00974	A0A099ZLV5	A0A099ZW09	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	Nucleoporin Nup37.	0.513
N309_00290	N309_01797	A0A099ZLV5	A0A099YZ91	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD repeat and SOCS box-containing protein 1.	0.553
N309_00290	N309_01839	A0A099ZLV5	A0A099ZAD5	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	Methylosome protein 50.	0.465
N309_00290	N309_02070	A0A099ZLV5	A0A099ZJR8	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	Histone-binding protein RBBP7.	0.515
N309_00290	N309_02075	A0A099ZLV5	A0A099ZRJ9	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	POC1 centriolar protein A.	0.566
N309_00290	N309_02196	A0A099ZLV5	A0A099Z469	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD repeat and SOCS box-containing protein 2.	0.559
N309_00290	N309_02773	A0A099ZLV5	A0A099Z2Q3	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD repeat-containing protein 52.	0.463
N309_00290	N309_02783	A0A099ZLV5	A0A099Z676	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD repeat, SAM and U-box domain-containing protein 1.	0.648
N309_00290	N309_03028	A0A099ZLV5	A0A099ZFG5	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD repeat and FYVE domain-containing protein 2.	0.463
N309_00290	N309_04633	A0A099ZLV5	A0A099Z4N5	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	mRNA export factor.	0.507
N309_00290	N309_04693	A0A099ZLV5	A0A099Z9G7	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD repeat-containing protein 88.	0.568
N309_00290	N309_05100	A0A099ZLV5	A0A099YQN6	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	WD repeat-containing protein 16.	0.513
N309_00290	N309_05466	A0A099ZLV5	A0A099ZD70	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	Nucleoporin Nup43.	0.429
N309_00290	N309_06167	A0A099ZLV5	A0A099Z609	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	Transducin beta-like 2.	0.463
N309_00290	N309_06578	A0A099ZLV5	A0A099YSF3	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	F-box-like/WD repeat-containing protein TBL1X.	0.463
N309_00290	N309_06685	A0A099ZLV5	A0A099Z0B1	Apoptotic protease-activating factor 1; Oligomeric Apaf-1 mediates the cytochrome c-dependent autocatalytic activation of pro-caspase-9 (Apaf-3), leading to the activation of caspase-3 and apoptosis. This activation requires ATP.	E3 ubiquitin-protein ligase RFWD2.	0.421