STRINGSTRING
N309_08095 N309_08095 N309_08248 N309_08248 N309_14387 N309_14387 N309_06439 N309_06439 N309_00248 N309_00248 N309_11983 N309_11983 N309_14168 N309_14168 N309_10443 N309_10443 N309_03377 N309_03377 N309_07943 N309_07943 N309_01639 N309_01639 N309_10031 N309_10031 N309_03349 N309_03349 N309_12994 N309_12994 N309_07235 N309_07235 N309_11557 N309_11557 N309_07562 N309_07562 N309_03200 N309_03200 N309_00671 N309_00671 N309_10191 N309_10191 N309_02059 N309_02059 N309_05495 N309_05495
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N309_08095Pleckstrin homology domain-containing family D member 1. (214 aa)
N309_08248Retinol-binding protein 3. (1234 aa)
N309_14387Retinaldehyde-binding protein 1. (312 aa)
N309_06439DEP domain-containing protein 1A. (802 aa)
N309_00248Patched domain-containing protein 1. (771 aa)
N309_11983Cytochrome P450 4V2; Belongs to the cytochrome P450 family. (511 aa)
N309_14168Transthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. (150 aa)
N309_10443Patched domain-containing protein 4. (887 aa)
N309_03377Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (301 aa)
N309_07943Retinol dehydrogenase 7. (331 aa)
N309_01639Unconventional myosin-XV; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (913 aa)
N309_10031Patched domain-containing protein 3. (598 aa)
N309_03349N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D. (395 aa)
N309_12994Retinol-binding protein 4. (154 aa)
N309_07235Rhodopsin. (355 aa)
N309_11557Rhodopsin. (350 aa)
N309_07562Retinol dehydrogenase 8; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (283 aa)
N309_03200Retinol dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (233 aa)
N309_00671Acid sphingomyelinase-like phosphodiesterase 3a. (412 aa)
N309_10191Retinol-binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (118 aa)
N309_02059Unconventional myosin-XV. (518 aa)
N309_05495Stimulated by retinoic acid 6. (622 aa)
Your Current Organism:
Tinamus guttatus
NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou
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