STRINGSTRING
N309_03220 N309_03220 N309_00213 N309_00213 N309_12917 N309_12917 N309_13124 N309_13124 N309_12599 N309_12599 N309_01756 N309_01756 N309_11228 N309_11228 N309_07848 N309_07848 N309_01012 N309_01012 N309_02907 N309_02907 N309_12150 N309_12150 N309_14013 N309_14013 N309_05475 N309_05475 N309_05243 N309_05243 N309_05691 N309_05691 N309_00346 N309_00346 N309_02854 N309_02854 N309_09503 N309_09503 N309_09974 N309_09974 N309_07329 N309_07329 N309_05665 N309_05665 N309_14111 N309_14111 N309_09958 N309_09958 N309_09242 N309_09242 N309_05870 N309_05870 N309_01554 N309_01554 N309_13144 N309_13144 N309_00334 N309_00334 N309_10014 N309_10014 N309_10858 N309_10858 N309_13231 N309_13231 N309_12126 N309_12126 N309_11043 N309_11043 N309_03810 N309_03810 N309_07528 N309_07528 N309_10738 N309_10738
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N309_03220Ubiquitin carboxyl-terminal hydrolase CYLD; Belongs to the peptidase C19 family. (963 aa)
N309_00213Optineurin. (284 aa)
N309_12917Ubiquitin-conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
N309_13124MAP kinase-activated protein kinase 2; Belongs to the protein kinase superfamily. (343 aa)
N309_12599Tumor necrosis factor alpha-induced protein 3. (799 aa)
N309_01756Calcium-binding and coiled-coil domain-containing protein 2. (254 aa)
N309_11228TNF receptor-associated factor 2. (463 aa)
N309_07848CASP8 and FADD-like apoptosis regulator; Belongs to the peptidase C14A family. (487 aa)
N309_01012Tumor necrosis factor receptor type 1-associated DEATH domain protein. (307 aa)
N309_02907Tumor necrosis factor ligand superfamily member 10; Belongs to the tumor necrosis factor family. (248 aa)
N309_12150Serine/threonine-protein kinase ULK2. (86 aa)
N309_14013TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (528 aa)
N309_05475Serine/threonine-protein kinase TBK1. (716 aa)
N309_05243Inactive ubiquitin thioesterase FAM105A. (331 aa)
N309_05691OTU domain-containing protein 1. (191 aa)
N309_00346KxDL motif-containing protein 1. (141 aa)
N309_02854Signal peptide peptidase-like 2A. (481 aa)
N309_09503Tax1-binding protein 1. (823 aa)
N309_09974Ubiquitin carboxyl-terminal hydrolase. (888 aa)
N309_07329Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family. (118 aa)
N309_05665Polyubiquitin-C. (228 aa)
N309_14111Tumor necrosis factor receptor superfamily member 1A. (411 aa)
N309_09958STIP1 homology and U box-containing protein 1. (251 aa)
N309_09242Protein FADD. (179 aa)
N309_05870Transmembrane protein 198. (356 aa)
N309_01554Inhibitor of nuclear factor kappa-B kinase subunit epsilon. (369 aa)
N309_13144Spermatogenesis-associated protein 2. (524 aa)
N309_00334Baculoviral IAP repeat-containing protein 7-B. (302 aa)
N309_10014CAP-Gly domain-containing linker protein 4. (697 aa)
N309_10858Serine/threonine-protein kinase ULK1. (923 aa)
N309_13231Signal peptide peptidase-like 2B. (572 aa)
N309_12126Ubiquitin carboxyl-terminal hydrolase CYLD. (223 aa)
N309_11043WD repeat-containing protein 31. (274 aa)
N309_03810Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. (140 aa)
N309_07528Inhibitor of apoptosis protein. (611 aa)
N309_10738Ubiquitin-40S ribosomal protein S27a. (158 aa)
Your Current Organism:
Tinamus guttatus
NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou
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