STRINGSTRING
N309_10967 N309_10967 N309_15110 N309_15110 N309_07469 N309_07469 N309_02197 N309_02197 N309_05550 N309_05550 N309_00346 N309_00346 N309_06266 N309_06266 N309_10738 N309_10738 N309_00531 N309_00531 N309_05665 N309_05665 N309_09143 N309_09143 N309_09271 N309_09271 N309_07138 N309_07138 N309_11916 N309_11916 N309_03449 N309_03449 N309_04851 N309_04851 N309_07986 N309_07986 N309_12588 N309_12588
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N309_10967Replication protein A 14 kDa subunit. (101 aa)
N309_15110RCC1 and BTB domain-containing protein 2. (530 aa)
N309_07469RCC1 and BTB domain-containing protein 1. (532 aa)
N309_02197Replication factor C subunit 5. (301 aa)
N309_05550Meiosis-specific with OB domain-containing protein. (476 aa)
N309_00346KxDL motif-containing protein 1. (141 aa)
N309_06266Replication factor C subunit 3. (356 aa)
N309_10738Ubiquitin-40S ribosomal protein S27a. (158 aa)
N309_00531DNA polymerase zeta catalytic subunit. (3120 aa)
N309_05665Polyubiquitin-C. (228 aa)
N309_09143ATPase family AAA domain-containing protein 5. (1773 aa)
N309_09271Replication factor C subunit 2. (316 aa)
N309_07138Replication protein A 32 kDa subunit. (203 aa)
N309_11916DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1254 aa)
N309_03449Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
N309_04851Mitotic spindle assembly checkpoint protein MAD2B. (211 aa)
N309_07986Replication factor C subunit 4. (318 aa)
N309_12588Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (531 aa)
Your Current Organism:
Tinamus guttatus
NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou
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