STRINGSTRING
N309_05514 N309_05514 N309_08401 N309_08401 N309_15039 N309_15039 N309_15044 N309_15044 N309_10963 N309_10963 N309_10884 N309_10884 N309_01872 N309_01872 N309_07755 N309_07755 N309_14933 N309_14933 N309_08300 N309_08300 N309_05054 N309_05054 N309_07217 N309_07217 N309_06171 N309_06171 N309_12781 N309_12781 N309_01407 N309_01407 N309_13363 N309_13363 N309_04525 N309_04525 N309_14350 N309_14350 N309_13364 N309_13364 N309_00346 N309_00346 N309_07417 N309_07417 N309_08435 N309_08435 N309_05989 N309_05989 N309_10738 N309_10738 N309_15508 N309_15508 N309_08062 N309_08062 N309_05665 N309_05665 N309_01136 N309_01136 N309_01279 N309_01279 N309_07678 N309_07678 N309_08964 N309_08964 N309_07141 N309_07141 N309_13853 N309_13853 N309_05421 N309_05421 N309_05423 N309_05423 N309_09477 N309_09477 N309_15096 N309_15096 N309_00010 N309_00010 N309_08630 N309_08630 N309_07169 N309_07169
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N309_05514Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (534 aa)
N309_08401DNA repair protein RAD50. (1315 aa)
N309_15039Histone H2B; Belongs to the histone H2B family. (92 aa)
N309_15044Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (80 aa)
N309_10963E3 ubiquitin-protein ligase RNF168. (569 aa)
N309_10884Histone H2B; Belongs to the histone H2B family. (98 aa)
N309_01872Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (346 aa)
N309_07755BRCA1-A complex subunit RAP80. (617 aa)
N309_14933E3 ubiquitin-protein ligase RNF169. (388 aa)
N309_08300Double-strand break repair protein MRE11; Belongs to the MRE11/RAD32 family. (622 aa)
N309_05054BRCA1-A complex subunit BRE. (226 aa)
N309_07217Ankyrin repeat domain-containing protein 12. (2045 aa)
N309_06171Tyrosine-protein kinase BAZ1B. (1467 aa)
N309_12781Amyloid beta A4 protein-binding family B member 2. (272 aa)
N309_01407Histone H2B; Belongs to the histone H2B family. (126 aa)
N309_13363E3 ubiquitin-protein ligase RNF8. (123 aa)
N309_04525Serine/threonine-protein kinase Chk2. (458 aa)
N309_14350BRCA1-A complex subunit Abraxas. (377 aa)
N309_13364E3 ubiquitin-protein ligase RNF8. (220 aa)
N309_00346KxDL motif-containing protein 1. (141 aa)
N309_07417Uncharacterized protein. (55 aa)
N309_08435Lysine-specific demethylase 4B. (616 aa)
N309_05989Histone H2B; Belongs to the histone H2B family. (126 aa)
N309_10738Ubiquitin-40S ribosomal protein S27a. (158 aa)
N309_15508Putative ankyrin repeat domain-containing protein 31. (739 aa)
N309_08062Small ubiquitin-related modifier. (100 aa)
N309_05665Polyubiquitin-C. (228 aa)
N309_01136Nibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (762 aa)
N309_01279SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family. (170 aa)
N309_07678Histone H2B; Belongs to the histone H2B family. (126 aa)
N309_08964Ubiquitin carboxyl-terminal hydrolase BAP1. (689 aa)
N309_07141Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (407 aa)
N309_13853E3 SUMO-protein ligase PIAS4. (486 aa)
N309_05421Histone H2B; Belongs to the histone H2B family. (126 aa)
N309_05423Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
N309_09477Tumor suppressor p53-binding protein 1. (1839 aa)
N309_15096SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5. (913 aa)
N309_00010Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (86 aa)
N309_08630Lysine-specific demethylase 4A. (989 aa)
N309_07169Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (601 aa)
Your Current Organism:
Tinamus guttatus
NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou
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