STRINGSTRING
N309_14244 N309_14244 N309_07648 N309_07648 N309_03449 N309_03449 N309_04704 N309_04704 N309_09197 N309_09197 N309_04791 N309_04791 N309_11100 N309_11100 N309_05679 N309_05679 N309_04396 N309_04396 N309_09271 N309_09271 N309_09143 N309_09143 N309_07546 N309_07546 N309_07789 N309_07789 N309_05665 N309_05665 N309_12176 N309_12176 N309_06856 N309_06856 N309_06941 N309_06941 N309_13215 N309_13215 N309_11642 N309_11642 N309_12094 N309_12094 N309_08062 N309_08062 N309_10738 N309_10738 N309_00725 N309_00725 N309_10188 N309_10188 N309_05654 N309_05654 N309_14691 N309_14691 N309_11909 N309_11909 N309_06266 N309_06266 N309_12063 N309_12063 N309_09319 N309_09319 N309_00346 N309_00346 N309_06665 N309_06665 N309_05550 N309_05550 N309_05592 N309_05592 N309_13924 N309_13924 N309_02686 N309_02686 N309_10998 N309_10998 N309_01987 N309_01987 N309_04874 N309_04874 N309_10187 N309_10187 N309_10197 N309_10197 N309_02197 N309_02197 N309_05789 N309_05789 N309_01234 N309_01234 N309_07469 N309_07469 N309_11372 N309_11372 N309_14432 N309_14432 N309_15697 N309_15697 N309_15003 N309_15003 N309_15236 N309_15236 N309_07138 N309_07138 N309_01279 N309_01279 N309_07603 N309_07603 N309_10588 N309_10588 N309_09218 N309_09218 N309_08225 N309_08225 N309_06780 N309_06780 N309_08135 N309_08135 N309_05574 N309_05574 N309_07514 N309_07514 N309_00642 N309_00642 N309_10179 N309_10179 N309_11040 N309_11040 N309_02041 N309_02041 N309_10243 N309_10243 N309_00482 N309_00482 N309_13528 N309_13528 N309_01939 N309_01939 N309_15485 N309_15485 N309_06804 N309_06804 N309_11973 N309_11973 N309_07978 N309_07978 N309_13025 N309_13025 N309_14911 N309_14911 N309_10907 N309_10907 N309_02586 N309_02586 N309_04747 N309_04747 N309_12932 N309_12932 N309_04332 N309_04332 N309_02578 N309_02578 N309_15110 N309_15110 N309_15691 N309_15691 N309_15176 N309_15176 N309_10967 N309_10967 N309_03790 N309_03790 N309_02602 N309_02602 N309_12588 N309_12588 N309_07986 N309_07986 N309_13638 N309_13638 N309_14064 N309_14064
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N309_14244DNA excision repair protein ERCC-8. (374 aa)
N309_07648DNA repair protein complementing XP-C cells. (829 aa)
N309_03449Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
N309_04704General transcription factor IIH subunit 3. (275 aa)
N309_09197COP9 signalosome complex subunit 4. (383 aa)
N309_04791DNA-directed RNA polymerases I, II, and III subunit RPABC2. (96 aa)
N309_11100COP9 signalosome complex subunit 7b. (264 aa)
N309_05679RING-box protein 1. (78 aa)
N309_04396UV-stimulated scaffold protein A. (182 aa)
N309_09271Replication factor C subunit 2. (316 aa)
N309_09143ATPase family AAA domain-containing protein 5. (1773 aa)
N309_07546DNA excision repair protein ERCC-6. (1507 aa)
N309_07789DNA-directed RNA polymerase II subunit RPB4. (119 aa)
N309_05665Polyubiquitin-C. (228 aa)
N309_12176Transcription elongation factor A protein 2. (283 aa)
N309_06856Non-histone chromosomal protein HMG-14. (60 aa)
N309_06941DNA helicase INO80. (1195 aa)
N309_13215DNA-directed RNA polymerase II subunit RPB7. (79 aa)
N309_11642INO80 complex subunit C. (141 aa)
N309_12094Transcriptional repressor protein YY1. (196 aa)
N309_08062Small ubiquitin-related modifier. (100 aa)
N309_10738Ubiquitin-40S ribosomal protein S27a. (158 aa)
N309_00725Zinc finger protein 830. (236 aa)
N309_10188Protein phosphatase 1 regulatory subunit 42. (255 aa)
N309_05654COP9 signalosome complex subunit 1. (481 aa)
N309_14691DNA polymerase epsilon subunit 2. (294 aa)
N309_11909RING finger protein 165. (330 aa)
N309_06266Replication factor C subunit 3. (356 aa)
N309_12063Non-histone chromosomal protein HMG-17. (85 aa)
N309_09319Transcription elongation factor A protein 3. (287 aa)
N309_00346KxDL motif-containing protein 1. (141 aa)
N309_06665TFIIH basal transcription factor complex helicase XPB subunit. (705 aa)
N309_05550Meiosis-specific with OB domain-containing protein. (476 aa)
N309_05592DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
N309_13924DNA repair protein complementing XP-G cells. (1127 aa)
N309_02686Ubiquitin carboxyl-terminal hydrolase 45. (537 aa)
N309_10998E3 SUMO-protein ligase PIAS1. (495 aa)
N309_01987DNA polymerase kappa. (868 aa)
N309_04874E3 ubiquitin-protein ligase Arkadia. (824 aa)
N309_10187COP9 signalosome complex subunit 5. (286 aa)
N309_10197Chromodomain-helicase-DNA-binding protein 1-like. (856 aa)
N309_02197Replication factor C subunit 5. (301 aa)
N309_05789Ubiquitin carboxyl-terminal hydrolase 7. (1076 aa)
N309_01234INO80 complex subunit B. (135 aa)
N309_07469RCC1 and BTB domain-containing protein 1. (532 aa)
N309_11372Transcription elongation factor A N-terminal and central domain-containing protein 2. (175 aa)
N309_14432Microspherule protein 1. (74 aa)
N309_15697UV excision repair protein RAD23 B. (356 aa)
N309_15003Pre-mRNA-splicing factor ISY1. (219 aa)
N309_15236DNA-directed RNA polymerase II subunit RPB3. (246 aa)
N309_07138Replication protein A 32 kDa subunit. (203 aa)
N309_01279SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family. (170 aa)
N309_07603General transcription factor IIH subunit 1. (548 aa)
N309_10588Small ubiquitin-related modifier. (86 aa)
N309_09218Cyclin-dependent kinase 7. (316 aa)
N309_08225DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
N309_06780Transcription elongation factor A N-terminal and central domain-containing protein. (362 aa)
N309_08135BTB/POZ domain-containing protein KCTD2. (104 aa)
N309_05574RNA polymerase II-associated protein 3. (670 aa)
N309_07514PHD finger protein 3. (1336 aa)
N309_00642DNA polymerase delta subunit 2. (250 aa)
N309_10179COP9 signalosome complex subunit 8. (182 aa)
N309_11040DNA polymerase epsilon subunit 3. (121 aa)
N309_02041WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. (434 aa)
N309_10243TFIIH basal transcription factor complex helicase XPD subunit. (611 aa)
N309_00482INO80 complex subunit D. (929 aa)
N309_13528Protein NRDE2. (1146 aa)
N309_01939Cullin-4B; Belongs to the cullin family. (875 aa)
N309_15485Transcription elongation factor A protein 1. (283 aa)
N309_06804Poly [ADP-ribose] polymerase 1. (93 aa)
N309_11973Cyclin-H; Belongs to the cyclin family. (300 aa)
N309_07978DNA-directed RNA polymerases I, II, and III subunit RPABC3. (126 aa)
N309_13025Small ubiquitin-related modifier. (89 aa)
N309_14911Cullin-4A; Belongs to the cullin family. (504 aa)
N309_10907Centrin-2. (171 aa)
N309_02586DNA damage-binding protein 1. (1118 aa)
N309_04747Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (232 aa)
N309_12932DNA repair protein complementing XP-A cells. (57 aa)
N309_04332General transcription factor IIH subunit 5. (68 aa)
N309_02578Pre-mRNA-processing factor 19. (479 aa)
N309_15110RCC1 and BTB domain-containing protein 2. (530 aa)
N309_15691DNA-directed RNA polymerase II subunit RPB11-a. (69 aa)
N309_15176COP9 signalosome complex subunit 3. (412 aa)
N309_10967Replication protein A 14 kDa subunit. (101 aa)
N309_03790CDK-activating kinase assembly factor MAT1. (279 aa)
N309_02602Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily. (526 aa)
N309_12588Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (531 aa)
N309_07986Replication factor C subunit 4. (318 aa)
N309_13638RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (409 aa)
N309_14064DNA-directed RNA polymerases I, II, and III subunit RPABC1. (183 aa)
Your Current Organism:
Tinamus guttatus
NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou
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