STRINGSTRING
N309_04747 N309_04747 N309_02586 N309_02586 N309_14911 N309_14911 N309_07978 N309_07978 N309_06780 N309_06780 N309_11973 N309_11973 N309_08225 N309_08225 N309_09218 N309_09218 N309_07603 N309_07603 N309_03790 N309_03790 N309_15003 N309_15003 N309_11372 N309_11372 N309_05789 N309_05789 N309_10187 N309_10187 N309_05592 N309_05592 N309_06665 N309_06665 N309_00346 N309_00346 N309_09319 N309_09319 N309_12063 N309_12063 N309_05654 N309_05654 N309_10188 N309_10188 N309_00725 N309_00725 N309_10738 N309_10738 N309_13215 N309_13215 N309_06856 N309_06856 N309_12176 N309_12176 N309_05665 N309_05665 N309_07789 N309_07789 N309_07546 N309_07546 N309_15176 N309_15176 N309_10243 N309_10243 N309_13528 N309_13528 N309_01939 N309_01939 N309_15485 N309_15485 N309_15691 N309_15691 N309_10179 N309_10179 N309_15236 N309_15236 N309_04396 N309_04396 N309_05679 N309_05679 N309_11100 N309_11100 N309_04791 N309_04791 N309_09197 N309_09197 N309_04704 N309_04704 N309_14244 N309_14244 N309_14064 N309_14064 N309_02578 N309_02578 N309_04332 N309_04332 N309_12932 N309_12932
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N309_04747Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (232 aa)
N309_02586DNA damage-binding protein 1. (1118 aa)
N309_14911Cullin-4A; Belongs to the cullin family. (504 aa)
N309_07978DNA-directed RNA polymerases I, II, and III subunit RPABC3. (126 aa)
N309_06780Transcription elongation factor A N-terminal and central domain-containing protein. (362 aa)
N309_11973Cyclin-H; Belongs to the cyclin family. (300 aa)
N309_08225DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
N309_09218Cyclin-dependent kinase 7. (316 aa)
N309_07603General transcription factor IIH subunit 1. (548 aa)
N309_03790CDK-activating kinase assembly factor MAT1. (279 aa)
N309_15003Pre-mRNA-splicing factor ISY1. (219 aa)
N309_11372Transcription elongation factor A N-terminal and central domain-containing protein 2. (175 aa)
N309_05789Ubiquitin carboxyl-terminal hydrolase 7. (1076 aa)
N309_10187COP9 signalosome complex subunit 5. (286 aa)
N309_05592DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
N309_06665TFIIH basal transcription factor complex helicase XPB subunit. (705 aa)
N309_00346KxDL motif-containing protein 1. (141 aa)
N309_09319Transcription elongation factor A protein 3. (287 aa)
N309_12063Non-histone chromosomal protein HMG-17. (85 aa)
N309_05654COP9 signalosome complex subunit 1. (481 aa)
N309_10188Protein phosphatase 1 regulatory subunit 42. (255 aa)
N309_00725Zinc finger protein 830. (236 aa)
N309_10738Ubiquitin-40S ribosomal protein S27a. (158 aa)
N309_13215DNA-directed RNA polymerase II subunit RPB7. (79 aa)
N309_06856Non-histone chromosomal protein HMG-14. (60 aa)
N309_12176Transcription elongation factor A protein 2. (283 aa)
N309_05665Polyubiquitin-C. (228 aa)
N309_07789DNA-directed RNA polymerase II subunit RPB4. (119 aa)
N309_07546DNA excision repair protein ERCC-6. (1507 aa)
N309_15176COP9 signalosome complex subunit 3. (412 aa)
N309_10243TFIIH basal transcription factor complex helicase XPD subunit. (611 aa)
N309_13528Protein NRDE2. (1146 aa)
N309_01939Cullin-4B; Belongs to the cullin family. (875 aa)
N309_15485Transcription elongation factor A protein 1. (283 aa)
N309_15691DNA-directed RNA polymerase II subunit RPB11-a. (69 aa)
N309_10179COP9 signalosome complex subunit 8. (182 aa)
N309_15236DNA-directed RNA polymerase II subunit RPB3. (246 aa)
N309_04396UV-stimulated scaffold protein A. (182 aa)
N309_05679RING-box protein 1. (78 aa)
N309_11100COP9 signalosome complex subunit 7b. (264 aa)
N309_04791DNA-directed RNA polymerases I, II, and III subunit RPABC2. (96 aa)
N309_09197COP9 signalosome complex subunit 4. (383 aa)
N309_04704General transcription factor IIH subunit 3. (275 aa)
N309_14244DNA excision repair protein ERCC-8. (374 aa)
N309_14064DNA-directed RNA polymerases I, II, and III subunit RPABC1. (183 aa)
N309_02578Pre-mRNA-processing factor 19. (479 aa)
N309_04332General transcription factor IIH subunit 5. (68 aa)
N309_12932DNA repair protein complementing XP-A cells. (57 aa)
Your Current Organism:
Tinamus guttatus
NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou
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