STRINGSTRING
N309_00071 N309_00071 N309_07138 N309_07138 N309_00554 N309_00554 N309_14388 N309_14388 N309_12098 N309_12098 N309_09509 N309_09509 N309_10967 N309_10967 N309_02544 N309_02544 N309_12588 N309_12588 N309_06215 N309_06215 N309_05665 N309_05665 N309_07597 N309_07597 N309_12042 N309_12042 N309_10738 N309_10738 N309_13910 N309_13910 N309_10529 N309_10529 N309_02447 N309_02447 N309_00346 N309_00346 N309_01118 N309_01118 N309_05550 N309_05550 N309_04690 N309_04690 N309_12568 N309_12568 N309_04617 N309_04617 N309_08721 N309_08721 N309_00189 N309_00189 N309_09976 N309_09976
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N309_00071Serine/threonine-protein kinase atr. (58 aa)
N309_07138Replication protein A 32 kDa subunit. (203 aa)
N309_00554Centromere protein S. (123 aa)
N309_14388Fanconi anemia group I protein. (1311 aa)
N309_12098E3 ubiquitin-protein ligase FANCL. (346 aa)
N309_09509Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (1020 aa)
N309_10967Replication protein A 14 kDa subunit. (101 aa)
N309_02544ATR-interacting protein. (681 aa)
N309_12588Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (531 aa)
N309_06215Fanconi anemia group C protein. (556 aa)
N309_05665Polyubiquitin-C. (228 aa)
N309_07597Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2661 aa)
N309_12042Proline and serine-rich protein 1. (941 aa)
N309_10738Ubiquitin-40S ribosomal protein S27a. (158 aa)
N309_13910WD repeat-containing protein 48. (645 aa)
N309_10529Crossover junction endonuclease EME1. (514 aa)
N309_02447Fanconi anemia group B protein. (865 aa)
N309_00346KxDL motif-containing protein 1. (141 aa)
N309_01118Fanconi anemia group A protein. (1399 aa)
N309_05550Meiosis-specific with OB domain-containing protein. (476 aa)
N309_04690Fanconi anemia-associated protein of 24 kDa. (209 aa)
N309_12568Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family. (150 aa)
N309_04617Nuclear transport factor 2. (126 aa)
N309_08721Ubiquitin carboxyl-terminal hydrolase. (792 aa)
N309_00189Crossover junction endonuclease EME1. (101 aa)
N309_09976Fanconi anemia group D2 protein. (1432 aa)
Your Current Organism:
Tinamus guttatus
NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou
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