STRINGSTRING
N309_05538 N309_05538 N309_14032 N309_14032 N309_05423 N309_05423 N309_11555 N309_11555 N309_01089 N309_01089 N309_11864 N309_11864 N309_13319 N309_13319 N309_15044 N309_15044 N309_15039 N309_15039 N309_12759 N309_12759 N309_01664 N309_01664 N309_00010 N309_00010
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N309_05538Endonuclease III-like 1. (128 aa)
N309_14032Uncharacterized protein. (193 aa)
N309_05423Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
N309_11555Methyl-CpG-binding domain protein 4. (181 aa)
N309_01089DNA-3-methyladenine glycosylase. (263 aa)
N309_11864Endonuclease 8-like 2. (314 aa)
N309_13319Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family. (276 aa)
N309_15044Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (80 aa)
N309_15039Histone H2B; Belongs to the histone H2B family. (92 aa)
N309_12759G/T mismatch-specific thymine DNA glycosylase. (401 aa)
N309_01664Uncharacterized protein. (249 aa)
N309_00010Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (86 aa)
Your Current Organism:
Tinamus guttatus
NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou
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