60 items (Tinamus guttatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N309_10153	26S proteasome non-ATPase regulatory subunit 13. (342 aa)
	N309_07091	Proteasome subunit alpha type. (248 aa)
	N309_09302	Proteasome endopeptidase complex. (216 aa)
	N309_13674	RAC-beta serine/threonine-protein kinase; Belongs to the protein kinase superfamily. (346 aa)
	N309_14967	Sestrin-3. (466 aa)
	N309_06996	26S proteasome non-ATPase regulatory subunit 14. (310 aa)
	N309_00448	Cyclic AMP-dependent transcription factor ATF-4. (355 aa)
	N309_13509	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
	N309_08766	26S proteasome non-ATPase regulatory subunit 12. (420 aa)
	N309_11799	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (388 aa)
	N309_05665	Polyubiquitin-C. (228 aa)
	N309_14696	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (303 aa)
	N309_10947	S-phase kinase-associated protein 2. (275 aa)
	N309_13307	Proteasome subunit beta type-4. (213 aa)
	N309_08970	Cullin-3; Belongs to the cullin family. (547 aa)
	N309_12889	Kelch-like 18. (398 aa)
	N309_10738	Ubiquitin-40S ribosomal protein S27a. (158 aa)
	N309_02966	CREB-binding protein. (2401 aa)
	N309_02502	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily. (475 aa)
	N309_01305	26S proteasome non-ATPase regulatory subunit 6. (272 aa)
	N309_13028	Proteasome inhibitor PI31 subunit. (228 aa)
	N309_03581	Microtubule-associated proteins 1A/1B light chain 3B. (108 aa)
	N309_15195	Cullin-1; Belongs to the cullin family. (785 aa)
	N309_13341	Kelch-like 17. (593 aa)
	N309_00346	KxDL motif-containing protein 1. (141 aa)
	N309_06994	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (811 aa)
	N309_11332	Proteasome subunit beta. (203 aa)
	N309_12073	26S proteasome non-ATPase regulatory subunit 10. (189 aa)
	N309_13488	Sestrin-3. (114 aa)
	N309_11782	Proteasome subunit beta. (171 aa)
	N309_01726	Mitochondrial ubiquitin ligase activator of NFKB 1. (283 aa)
	N309_03352	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (433 aa)
	N309_13749	26S proteasome non-ATPase regulatory subunit 7. (297 aa)
	N309_15116	Nuclear protein localization protein 4. (561 aa)
	N309_10627	Proteasome endopeptidase complex. (211 aa)
	N309_03956	Peroxiredoxin-1. (201 aa)
	N309_07226	Transcription factor MafK. (156 aa)
	N309_00329	Proteasome activator complex subunit 3. (157 aa)
	N309_11134	Sequestosome-1. (398 aa)
	N309_10962	UBX domain-containing protein 7. (468 aa)
	N309_07110	Proteasome subunit alpha type. (261 aa)
	N309_13527	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (439 aa)
	N309_03214	Transcription regulator protein BACH1. (766 aa)
	N309_06051	Ubiquitin fusion degradation protein 1. (306 aa)
	N309_07687	Sestrin-2. (133 aa)
	N309_08427	Proteasome subunit beta type-3. (158 aa)
	N309_06131	26S proteasome non-ATPase regulatory subunit 11. (80 aa)
	N309_08822	RAC-alpha serine/threonine-protein kinase; Belongs to the protein kinase superfamily. (465 aa)
	N309_06355	F-box/WD repeat-containing protein 1A. (593 aa)
	N309_15054	Transcription regulator protein BACH2. (824 aa)
	N309_15444	Nuclear factor erythroid 2-related factor 1; Belongs to the bZIP family. (302 aa)
	N309_02759	26S proteasome non-ATPase regulatory subunit 9. (203 aa)
	N309_11230	26S proteasome non-ATPase regulatory subunit 5. (458 aa)
	N309_06154	F-box/LRR-repeat protein 17. (326 aa)
	N309_09396	26S proteasome non-ATPase regulatory subunit 1. (951 aa)
	N309_14897	Proteasome endopeptidase complex. (227 aa)
	N309_06423	Spermatogenesis-associated protein 5; Belongs to the AAA ATPase family. (680 aa)
	N309_13828	Sestrin-1. (478 aa)
	N309_05008	Proteasome endopeptidase complex. (222 aa)
	N309_05679	RING-box protein 1. (78 aa)

Your Current Organism:

Tinamus guttatus

NCBI taxonomy Id: 94827
Other names: T. guttatus, white-throated tinamou

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N309_00329	N309_01305	A0A099YXY8	A0A099Z9B6	Proteasome activator complex subunit 3.	26S proteasome non-ATPase regulatory subunit 6.	0.857
N309_00329	N309_02759	A0A099YXY8	A0A099ZT41	Proteasome activator complex subunit 3.	26S proteasome non-ATPase regulatory subunit 9.	0.620
N309_00329	N309_03214	A0A099YXY8	A0A099YW71	Proteasome activator complex subunit 3.	Transcription regulator protein BACH1.	0.559
N309_00329	N309_03352	A0A099YXY8	A0A099Z0V5	Proteasome activator complex subunit 3.	26S protease regulatory subunit 7; Belongs to the AAA ATPase family.	0.751
N309_00329	N309_05008	A0A099YXY8	A0A099ZN29	Proteasome activator complex subunit 3.	Proteasome endopeptidase complex.	0.991
N309_00329	N309_05665	A0A099YXY8	A0A099ZFY2	Proteasome activator complex subunit 3.	Polyubiquitin-C.	0.644
N309_00329	N309_05679	A0A099YXY8	A0A099ZLY4	Proteasome activator complex subunit 3.	RING-box protein 1.	0.602
N309_00329	N309_06051	A0A099YXY8	A0A099YUK7	Proteasome activator complex subunit 3.	Ubiquitin fusion degradation protein 1.	0.625
N309_00329	N309_06131	A0A099YXY8	A0A099YPT2	Proteasome activator complex subunit 3.	26S proteasome non-ATPase regulatory subunit 11.	0.813
N309_00329	N309_06154	A0A099YXY8	A0A099ZPU5	Proteasome activator complex subunit 3.	F-box/LRR-repeat protein 17.	0.480
N309_00329	N309_06423	A0A099YXY8	A0A099ZNH4	Proteasome activator complex subunit 3.	Spermatogenesis-associated protein 5; Belongs to the AAA ATPase family.	0.636
N309_00329	N309_06994	A0A099YXY8	A0A099Z7K8	Proteasome activator complex subunit 3.	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	0.636
N309_00329	N309_06996	A0A099YXY8	A0A099ZI36	Proteasome activator complex subunit 3.	26S proteasome non-ATPase regulatory subunit 14.	0.861
N309_00329	N309_07091	A0A099YXY8	A0A099ZLQ6	Proteasome activator complex subunit 3.	Proteasome subunit alpha type.	0.992
N309_00329	N309_07110	A0A099YXY8	A0A099YX21	Proteasome activator complex subunit 3.	Proteasome subunit alpha type.	0.991
N309_00329	N309_08427	A0A099YXY8	A0A099YR06	Proteasome activator complex subunit 3.	Proteasome subunit beta type-3.	0.983
N309_00329	N309_08766	A0A099YXY8	A0A099ZGB7	Proteasome activator complex subunit 3.	26S proteasome non-ATPase regulatory subunit 12.	0.853
N309_00329	N309_08970	A0A099YXY8	A0A099ZDM1	Proteasome activator complex subunit 3.	Cullin-3; Belongs to the cullin family.	0.607
N309_00329	N309_09302	A0A099YXY8	A0A099ZJM5	Proteasome activator complex subunit 3.	Proteasome endopeptidase complex.	0.990
N309_00329	N309_09396	A0A099YXY8	A0A099ZPT9	Proteasome activator complex subunit 3.	26S proteasome non-ATPase regulatory subunit 1.	0.768