(52 nodes) Mostly uncharacterized, incl. Dopaminergic neuron differentiation, and Cell differentiation involved in embryonic placenta development network (Callithrix jacchus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SALL4	Uncharacterized protein. (986 aa)
	SALL1	Spalt like transcription factor 1. (1322 aa)
	NSD2	Histone-lysine N-methyltransferase NSD2 isoform 1. (1365 aa)
	KLF17	Kruppel like factor 17. (414 aa)
	LMX1A	LIM homeobox transcription factor 1 alpha. (382 aa)
	UTF1	Uncharacterized protein. (342 aa)
	GDF3	Growth differentiation factor 3. (364 aa)
	FOXA2	Forkhead box A2. (456 aa)
	SALL2	Spalt like transcription factor 2. (1009 aa)
	GRB7	Growth factor receptor bound protein 7. (554 aa)
	TBX3	T-box transcription factor TBX3 isoform 2. (743 aa)
	LIN28A	Lin-28 homolog A. (209 aa)
	CDX4	Caudal type homeobox 4. (284 aa)
	MIXL1	Mix paired-like homeobox. (236 aa)
	CEBPD	CCAAT/enhancer-binding protein. (268 aa)
	ETV5	ETS translocation variant 5. (510 aa)
	PITX3	Homeobox protein. (302 aa)
	CORIN	Corin, serine peptidase. (1042 aa)
	NANOG	Homeobox domain-containing protein. (305 aa)
	CDX2	Caudal type homeobox 2. (305 aa)
	POU5F1-2	Uncharacterized protein. (146 aa)
	GATA6	GATA binding protein 6. (592 aa)
	F7F1K7_CALJA	Uncharacterized protein. (277 aa)
	KLF5	Krueppel-like factor 5. (457 aa)
	SPRY1	Sprouty RTK signaling antagonist 1. (356 aa)
	SOX15	SRY-box transcription factor 15. (233 aa)
	POU5F2	Homeobox domain-containing protein. (156 aa)
	SOX2	Transcription factor SOX-2. (319 aa)
	EOMES	Eomesodermin. (706 aa)
	EN1	Homeobox protein engrailed-like. (391 aa)
	OTX2	Uncharacterized protein. (35 aa)
	ENSCJAP00000060201	Homeobox domain-containing protein. (305 aa)
	NR4A2	Nuclear receptor subfamily 4 group A member 2. (598 aa)
	SOX12	Transcription factor SOX. (314 aa)
	PRDM1	PR/SET domain 1. (838 aa)
	ENSCJAP00000062412	Kruppel like factor 2. (353 aa)
	CNPY1	Canopy FGF signaling regulator 1. (158 aa)
	DPPA3	Developmental pluripotency associated 3. (147 aa)
	LOC100395655	Uncharacterized protein. (270 aa)
	DPPA4	Uncharacterized protein. (94 aa)
	ESRRB	Estrogen related receptor beta. (454 aa)
	TDGF1	Growth factor; Belongs to the EGF-CFC (Cripto-1/FRL1/Cryptic) family. (186 aa)
	POU5F1	POU-specific domain-containing protein. (484 aa)
	ENSCJAP00000073101	Homeobox domain-containing protein. (286 aa)
	ENSCJAP00000073738	HMG box domain-containing protein. (322 aa)
	ENSCJAP00000073767	Uncharacterized protein. (146 aa)
	TBXT	T-box transcription factor T. (448 aa)
	TFCP2L1	Transcription factor CP2 like 1. (612 aa)
	SOX17	SRY-box transcription factor 17. (414 aa)
	EBF3	EBF transcription factor 3. (635 aa)
	KLF4	Kruppel like factor 4. (507 aa)
	ENSCJAP00000078581	Uncharacterized protein. (316 aa)

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDX2	EOMES	ENSCJAP00000036022	ENSCJAP00000052017	Caudal type homeobox 2.	Eomesodermin.	0.629
CDX2	FOXA2	ENSCJAP00000036022	ENSCJAP00000010628	Caudal type homeobox 2.	Forkhead box A2.	0.529
CDX2	GATA6	ENSCJAP00000036022	ENSCJAP00000038164	Caudal type homeobox 2.	GATA binding protein 6.	0.788
CDX2	KLF17	ENSCJAP00000036022	ENSCJAP00000007114	Caudal type homeobox 2.	Kruppel like factor 17.	0.437
CDX2	KLF4	ENSCJAP00000036022	ENSCJAP00000077416	Caudal type homeobox 2.	Kruppel like factor 4.	0.439
CDX2	POU5F1	ENSCJAP00000036022	ENSCJAP00000071643	Caudal type homeobox 2.	POU-specific domain-containing protein.	0.790
CDX2	POU5F1-2	ENSCJAP00000036022	ENSCJAP00000036806	Caudal type homeobox 2.	Uncharacterized protein.	0.790
CDX2	SOX17	ENSCJAP00000036022	ENSCJAP00000076388	Caudal type homeobox 2.	SRY-box transcription factor 17.	0.625
CDX2	SOX2	ENSCJAP00000036022	ENSCJAP00000047836	Caudal type homeobox 2.	Transcription factor SOX-2.	0.696
CDX2	TBX3	ENSCJAP00000036022	ENSCJAP00000017829	Caudal type homeobox 2.	T-box transcription factor TBX3 isoform 2.	0.508
CDX2	TBXT	ENSCJAP00000036022	ENSCJAP00000074573	Caudal type homeobox 2.	T-box transcription factor T.	0.547
CDX4	MIXL1	ENSCJAP00000020910	ENSCJAP00000023338	Caudal type homeobox 4.	Mix paired-like homeobox.	0.501
CDX4	TBXT	ENSCJAP00000020910	ENSCJAP00000074573	Caudal type homeobox 4.	T-box transcription factor T.	0.559
CEBPD	ENSCJAP00000062412	ENSCJAP00000025158	ENSCJAP00000062412	CCAAT/enhancer-binding protein.	Kruppel like factor 2.	0.428
CEBPD	KLF5	ENSCJAP00000025158	ENSCJAP00000039369	CCAAT/enhancer-binding protein.	Krueppel-like factor 5.	0.722
CEBPD	PRDM1	ENSCJAP00000025158	ENSCJAP00000062369	CCAAT/enhancer-binding protein.	PR/SET domain 1.	0.450
CEBPD	SOX12	ENSCJAP00000025158	ENSCJAP00000061665	CCAAT/enhancer-binding protein.	Transcription factor SOX.	0.418
CNPY1	CORIN	ENSCJAP00000064443	ENSCJAP00000035182	Canopy FGF signaling regulator 1.	Corin, serine peptidase.	0.484
CNPY1	EN1	ENSCJAP00000064443	ENSCJAP00000054534	Canopy FGF signaling regulator 1.	Homeobox protein engrailed-like.	0.624
CNPY1	ETV5	ENSCJAP00000064443	ENSCJAP00000027044	Canopy FGF signaling regulator 1.	ETS translocation variant 5.	0.566