(44 nodes) Homeobox protein, antennapedia type, conserved site, and Homeobox domain, metazoa network (Callithrix jacchus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PBX2	PBX homeobox 2. (431 aa)
	PBX1	Pre-B-cell leukemia transcription factor 1 isoform 1. (430 aa)
	DLX3	Distal-less homeobox 3. (287 aa)
	PBX3	Pre-B-cell leukemia transcription factor 3 isoform 1. (434 aa)
	HOXB13	Homeobox protein Hox-B13. (284 aa)
	HOXB9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (250 aa)
	HOXB7	Homeobox protein Hox-B7. (217 aa)
	HOXB6	Homeobox protein Hox-B6. (224 aa)
	HOXB5	Homeobox B5. (269 aa)
	HOXB4	Homeobox B4. (252 aa)
	HOXB1	Homeobox B1. (304 aa)
	HOXA1	Homeobox A1. (333 aa)
	HOXA2	Homeobox protein Hox-A2; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis; Belongs to the Antp homeobox family. Proboscipedia subfamily. (375 aa)
	HOXA3	Homeobox A3 isoform a (Predicted). (443 aa)
	HOXA5	Homeobox A5 (Predicted). (270 aa)
	HOXA4	Homeobox A4 (Predicted). (322 aa)
	HOXA6	Homeobox A6. (233 aa)
	HOXA11	Homeobox protein Hox-A11. (314 aa)
	HOXD10	Homeobox protein Hox-D10. (340 aa)
	HOXD4	Homeobox protein Hox-D4. (256 aa)
	HOXD1	Homeobox D1. (328 aa)
	IRX4	Iroquois homeobox 4. (520 aa)
	ARID3B	AT-rich interaction domain 3B. (561 aa)
	HOXA10	Homeobox domain-containing protein. (94 aa)
	HOXC9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (260 aa)
	HOXB3	Homeobox protein Hox-B3. (433 aa)
	HOXD9	Homeobox D9. (342 aa)
	HOXC6	Homeobox C6. (290 aa)
	HOXA7	Homeobox A7 (Predicted). (230 aa)
	HOXD11	Homeobox D11. (338 aa)
	HOXD13	Homeobox protein Hox-D13. (344 aa)
	HOXA9	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (271 aa)
	HOXC4	Homeobox C4. (264 aa)
	LMX1B	LIM homeobox transcription factor 1 beta. (402 aa)
	HOXB8	Homeobox B8. (243 aa)
	MEIS1	Meis homeobox 1. (463 aa)
	HOXA13	Homeobox A13. (385 aa)
	MEIS2	Homeobox protein Meis2 isoform c. (477 aa)
	PKNOX1	PBX/knotted 1 homeobox 1. (437 aa)
	HOXD8	Homeobox protein Hox-D8 isoform 1. (288 aa)
	HOXC5	Homeobox C5. (222 aa)
	ENSCJAP00000071518	Meis_PKNOX_N domain-containing protein. (152 aa)
	HOXD3	Homeobox D3. (432 aa)
	MAB21L1	Protein mab-21-like 1. (359 aa)

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID3B	HOXD13	ENSCJAP00000032788	ENSCJAP00000056480	AT-rich interaction domain 3B.	Homeobox protein Hox-D13.	0.448
ARID3B	HOXD9	ENSCJAP00000032788	ENSCJAP00000052857	AT-rich interaction domain 3B.	Homeobox D9.	0.687
DLX3	ENSCJAP00000071518	ENSCJAP00000012957	ENSCJAP00000071518	Distal-less homeobox 3.	Meis_PKNOX_N domain-containing protein.	0.692
DLX3	IRX4	ENSCJAP00000012957	ENSCJAP00000017189	Distal-less homeobox 3.	Iroquois homeobox 4.	0.422
DLX3	MEIS1	ENSCJAP00000012957	ENSCJAP00000060268	Distal-less homeobox 3.	Meis homeobox 1.	0.829
DLX3	MEIS2	ENSCJAP00000012957	ENSCJAP00000063497	Distal-less homeobox 3.	Homeobox protein Meis2 isoform c.	0.692
ENSCJAP00000071518	DLX3	ENSCJAP00000071518	ENSCJAP00000012957	Meis_PKNOX_N domain-containing protein.	Distal-less homeobox 3.	0.692
ENSCJAP00000071518	HOXA9	ENSCJAP00000071518	ENSCJAP00000058256	Meis_PKNOX_N domain-containing protein.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.463
ENSCJAP00000071518	HOXB13	ENSCJAP00000071518	ENSCJAP00000013827	Meis_PKNOX_N domain-containing protein.	Homeobox protein Hox-B13.	0.715
ENSCJAP00000071518	HOXB6	ENSCJAP00000071518	ENSCJAP00000013878	Meis_PKNOX_N domain-containing protein.	Homeobox protein Hox-B6.	0.482
ENSCJAP00000071518	HOXB7	ENSCJAP00000071518	ENSCJAP00000013868	Meis_PKNOX_N domain-containing protein.	Homeobox protein Hox-B7.	0.465
ENSCJAP00000071518	HOXB8	ENSCJAP00000071518	ENSCJAP00000059796	Meis_PKNOX_N domain-containing protein.	Homeobox B8.	0.402
ENSCJAP00000071518	HOXC4	ENSCJAP00000071518	ENSCJAP00000058488	Meis_PKNOX_N domain-containing protein.	Homeobox C4.	0.403
ENSCJAP00000071518	HOXC9	ENSCJAP00000071518	ENSCJAP00000034958	Meis_PKNOX_N domain-containing protein.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.454
ENSCJAP00000071518	HOXD8	ENSCJAP00000071518	ENSCJAP00000063895	Meis_PKNOX_N domain-containing protein.	Homeobox protein Hox-D8 isoform 1.	0.420
ENSCJAP00000071518	LMX1B	ENSCJAP00000071518	ENSCJAP00000058897	Meis_PKNOX_N domain-containing protein.	LIM homeobox transcription factor 1 beta.	0.532
ENSCJAP00000071518	MAB21L1	ENSCJAP00000071518	ENSCJAP00000078456	Meis_PKNOX_N domain-containing protein.	Protein mab-21-like 1.	0.566
ENSCJAP00000071518	MEIS1	ENSCJAP00000071518	ENSCJAP00000060268	Meis_PKNOX_N domain-containing protein.	Meis homeobox 1.	0.794
ENSCJAP00000071518	PBX1	ENSCJAP00000071518	ENSCJAP00000008611	Meis_PKNOX_N domain-containing protein.	Pre-B-cell leukemia transcription factor 1 isoform 1.	0.758
ENSCJAP00000071518	PBX2	ENSCJAP00000071518	ENSCJAP00000003408	Meis_PKNOX_N domain-containing protein.	PBX homeobox 2.	0.740