(17 nodes) Mixed, incl. Central element, and Synaptonemal complex protein 2-like network (Callithrix jacchus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MEI1	Meiotic double-stranded break formation protein 1. (1274 aa)
	SYCE2	Synaptonemal complex central element protein 2. (216 aa)
	SYCP2L	Synaptonemal complex protein 2 like. (786 aa)
	RNF212B	Ring finger protein 212B. (300 aa)
	TEX11	Testis expressed 11. (925 aa)
	CCNB1IP1	E3 ubiquitin-protein ligase CCNB1IP1. (277 aa)
	HORMAD2	HORMA domain containing 2. (307 aa)
	TEX12	Testis expressed 12. (123 aa)
	SYCP1	Synaptonemal complex protein 1. (906 aa)
	M1AP	Meiosis 1 associated protein. (548 aa)
	SHOC1	Shortage in chiasmata 1. (1445 aa)
	SYCP2	Synaptonemal complex protein 2. (1623 aa)
	C14orf39	Chromosome 14 open reading frame 39. (586 aa)
	MEIOC	Meiosis specific with coiled-coil domain. (954 aa)
	SYCE3	Synaptonemal complex central element protein 3. (88 aa)
	ENSCJAP00000062679	Cor1 domain-containing protein. (236 aa)
	SYCE1	Synaptonemal complex central element protein 1. (341 aa)

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C14orf39	SYCE1	ENSCJAP00000035485	ENSCJAP00000074200	Chromosome 14 open reading frame 39.	Synaptonemal complex central element protein 1.	0.567
C14orf39	SYCE2	ENSCJAP00000035485	ENSCJAP00000008596	Chromosome 14 open reading frame 39.	Synaptonemal complex central element protein 2.	0.573
C14orf39	SYCE3	ENSCJAP00000035485	ENSCJAP00000059424	Chromosome 14 open reading frame 39.	Synaptonemal complex central element protein 3.	0.545
C14orf39	SYCP1	ENSCJAP00000035485	ENSCJAP00000023315	Chromosome 14 open reading frame 39.	Synaptonemal complex protein 1.	0.531
C14orf39	TEX12	ENSCJAP00000035485	ENSCJAP00000022871	Chromosome 14 open reading frame 39.	Testis expressed 12.	0.555
CCNB1IP1	RNF212B	ENSCJAP00000018314	ENSCJAP00000014518	E3 ubiquitin-protein ligase CCNB1IP1.	Ring finger protein 212B.	0.403
CCNB1IP1	TEX11	ENSCJAP00000018314	ENSCJAP00000015110	E3 ubiquitin-protein ligase CCNB1IP1.	Testis expressed 11.	0.516
ENSCJAP00000062679	HORMAD2	ENSCJAP00000062679	ENSCJAP00000018961	Cor1 domain-containing protein.	HORMA domain containing 2.	0.490
ENSCJAP00000062679	SYCE1	ENSCJAP00000062679	ENSCJAP00000074200	Cor1 domain-containing protein.	Synaptonemal complex central element protein 1.	0.452
ENSCJAP00000062679	SYCE2	ENSCJAP00000062679	ENSCJAP00000008596	Cor1 domain-containing protein.	Synaptonemal complex central element protein 2.	0.479
ENSCJAP00000062679	SYCE3	ENSCJAP00000062679	ENSCJAP00000059424	Cor1 domain-containing protein.	Synaptonemal complex central element protein 3.	0.444
ENSCJAP00000062679	SYCP1	ENSCJAP00000062679	ENSCJAP00000023315	Cor1 domain-containing protein.	Synaptonemal complex protein 1.	0.596
ENSCJAP00000062679	SYCP2	ENSCJAP00000062679	ENSCJAP00000035052	Cor1 domain-containing protein.	Synaptonemal complex protein 2.	0.678
ENSCJAP00000062679	TEX12	ENSCJAP00000062679	ENSCJAP00000022871	Cor1 domain-containing protein.	Testis expressed 12.	0.471
HORMAD2	ENSCJAP00000062679	ENSCJAP00000018961	ENSCJAP00000062679	HORMA domain containing 2.	Cor1 domain-containing protein.	0.490
HORMAD2	MEI1	ENSCJAP00000018961	ENSCJAP00000004407	HORMA domain containing 2.	Meiotic double-stranded break formation protein 1.	0.424
HORMAD2	SYCE1	ENSCJAP00000018961	ENSCJAP00000074200	HORMA domain containing 2.	Synaptonemal complex central element protein 1.	0.650
HORMAD2	SYCE2	ENSCJAP00000018961	ENSCJAP00000008596	HORMA domain containing 2.	Synaptonemal complex central element protein 2.	0.734
HORMAD2	SYCE3	ENSCJAP00000018961	ENSCJAP00000059424	HORMA domain containing 2.	Synaptonemal complex central element protein 3.	0.463
HORMAD2	SYCP1	ENSCJAP00000018961	ENSCJAP00000023315	HORMA domain containing 2.	Synaptonemal complex protein 1.	0.751