(41 nodes) Sin3 complex, and NuRD complex network (Callithrix jacchus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CHD5	Chromodomain helicase DNA binding protein 5. (2007 aa)
	SINHCAF	SIN3-HDAC complex associated factor. (221 aa)
	BRMS1	BRMS1 transcriptional repressor and anoikis regulator. (246 aa)
	NYNRIN	NYN domain and retroviral integrase containing. (1898 aa)
	KDM5A	Lysine demethylase 5A. (1690 aa)
	CHD4	Chromodomain-helicase-DNA-binding protein 4. (1912 aa)
	SUDS3	Sin3 histone deacetylase corepressor complex component SDS3. (328 aa)
	SAP130	Sin3A associated protein 130. (1083 aa)
	PHF12	PHD finger protein 12 isoform 1. (1003 aa)
	ING1	Inhibitor of growth protein. (285 aa)
	MTA3	Metastasis associated 1 family member 3. (593 aa)
	CHD3	Chromodomain helicase DNA binding protein 3. (2056 aa)
	EMSY	EMSY transcriptional repressor, BRCA2 interacting. (1337 aa)
	SIN3A	SIN3 transcription regulator family member A. (1273 aa)
	WDR73	WD repeat domain 73. (371 aa)
	LOC100401598	Uncharacterized protein. (208 aa)
	PHF21B	PHD finger protein 21B. (467 aa)
	ARID4A	AT-rich interactive domain-containing protein 4A isoform I. (1257 aa)
	MTA2	Metastasis associated 1 family member 2. (668 aa)
	RBBP7	RB binding protein 7, chromatin remodeling factor. (464 aa)
	ARID4B	AT-rich interaction domain 4B. (1308 aa)
	GATAD2A	GATA zinc finger domain containing 2A. (748 aa)
	CDK2AP2	Cyclin-dependent kinase 2-associated protein; Belongs to the CDK2AP family. (126 aa)
	SIN3B	SIN3 transcription regulator family member B. (1265 aa)
	ENSCJAP00000057625	MBDa domain-containing protein. (195 aa)
	ZNF219	Zinc finger protein 219. (718 aa)
	MBD2	Methyl-CpG binding domain protein 2. (414 aa)
	SAP30L	Histone deacetylase complex subunit SAP30L isoform 1. (182 aa)
	GATAD1	GATA zinc finger domain-containing protein 1. (270 aa)
	MTA1	Metastasis associated 1. (733 aa)
	BRMS1L	Breast cancer metastasis-suppressor 1-like protein. (323 aa)
	ENSCJAP00000067889	Hist_deacetyl domain-containing protein. (209 aa)
	MORF4L1	MRG domain-containing protein. (367 aa)
	ENSCJAP00000068603	Uncharacterized protein. (120 aa)
	ENSCJAP00000068982	Uncharacterized protein. (95 aa)
	GATAD2B	GATA zinc finger domain containing 2B. (617 aa)
	MBD3	Methyl-CpG binding domain protein 3. (380 aa)
	ENSCJAP00000072250	Uncharacterized protein. (254 aa)
	SAP30	Histone deacetylase complex subunit SAP30. (220 aa)
	HDAC2	Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (491 aa)
	HDAC1	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (540 aa)

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4A	ARID4B	ENSCJAP00000034912	ENSCJAP00000050485	AT-rich interactive domain-containing protein 4A isoform I.	AT-rich interaction domain 4B.	0.853
ARID4A	BRMS1	ENSCJAP00000034912	ENSCJAP00000002710	AT-rich interactive domain-containing protein 4A isoform I.	BRMS1 transcriptional repressor and anoikis regulator.	0.997
ARID4A	BRMS1L	ENSCJAP00000034912	ENSCJAP00000067757	AT-rich interactive domain-containing protein 4A isoform I.	Breast cancer metastasis-suppressor 1-like protein.	0.980
ARID4A	CHD3	ENSCJAP00000034912	ENSCJAP00000027313	AT-rich interactive domain-containing protein 4A isoform I.	Chromodomain helicase DNA binding protein 3.	0.738
ARID4A	CHD4	ENSCJAP00000034912	ENSCJAP00000015064	AT-rich interactive domain-containing protein 4A isoform I.	Chromodomain-helicase-DNA-binding protein 4.	0.738
ARID4A	CHD5	ENSCJAP00000034912	ENSCJAP00000000214	AT-rich interactive domain-containing protein 4A isoform I.	Chromodomain helicase DNA binding protein 5.	0.738
ARID4A	EMSY	ENSCJAP00000034912	ENSCJAP00000028132	AT-rich interactive domain-containing protein 4A isoform I.	EMSY transcriptional repressor, BRCA2 interacting.	0.546
ARID4A	ENSCJAP00000057625	ENSCJAP00000034912	ENSCJAP00000057625	AT-rich interactive domain-containing protein 4A isoform I.	MBDa domain-containing protein.	0.600
ARID4A	ENSCJAP00000067889	ENSCJAP00000034912	ENSCJAP00000067889	AT-rich interactive domain-containing protein 4A isoform I.	Hist_deacetyl domain-containing protein.	0.943
ARID4A	ENSCJAP00000068603	ENSCJAP00000034912	ENSCJAP00000068603	AT-rich interactive domain-containing protein 4A isoform I.	Uncharacterized protein.	0.738
ARID4A	ENSCJAP00000068982	ENSCJAP00000034912	ENSCJAP00000068982	AT-rich interactive domain-containing protein 4A isoform I.	Uncharacterized protein.	0.861
ARID4A	ENSCJAP00000072250	ENSCJAP00000034912	ENSCJAP00000072250	AT-rich interactive domain-containing protein 4A isoform I.	Uncharacterized protein.	0.980
ARID4A	GATAD1	ENSCJAP00000034912	ENSCJAP00000066004	AT-rich interactive domain-containing protein 4A isoform I.	GATA zinc finger domain-containing protein 1.	0.583
ARID4A	GATAD2A	ENSCJAP00000034912	ENSCJAP00000054193	AT-rich interactive domain-containing protein 4A isoform I.	GATA zinc finger domain containing 2A.	0.718
ARID4A	GATAD2B	ENSCJAP00000034912	ENSCJAP00000070359	AT-rich interactive domain-containing protein 4A isoform I.	GATA zinc finger domain containing 2B.	0.720
ARID4A	HDAC1	ENSCJAP00000034912	ENSCJAP00000079075	AT-rich interactive domain-containing protein 4A isoform I.	Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.943
ARID4A	HDAC2	ENSCJAP00000034912	ENSCJAP00000074750	AT-rich interactive domain-containing protein 4A isoform I.	Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.	0.945
ARID4A	ING1	ENSCJAP00000034912	ENSCJAP00000026055	AT-rich interactive domain-containing protein 4A isoform I.	Inhibitor of growth protein.	0.817
ARID4A	KDM5A	ENSCJAP00000034912	ENSCJAP00000012858	AT-rich interactive domain-containing protein 4A isoform I.	Lysine demethylase 5A.	0.468
ARID4A	LOC100401598	ENSCJAP00000034912	ENSCJAP00000029719	AT-rich interactive domain-containing protein 4A isoform I.	Uncharacterized protein.	0.600