32 items (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSCJAP00000053805	Uncharacterized protein. (124 aa)
	TAF6L	TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L. (622 aa)
	TAF4	TATA-box binding protein associated factor 4. (1085 aa)
	ENSCJAP00000075765	Uncharacterized protein. (260 aa)
	GTF2F1	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (539 aa)
	ENSCJAP00000075599	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (115 aa)
	TAF1	Transcription initiation factor TFIID subunit. (1927 aa)
	GTF2E1	General transcription factor IIE subunit 1. (464 aa)
	ENSCJAP00000071842	TAFII28 domain-containing protein. (203 aa)
	ENSCJAP00000070800	TAFII28 domain-containing protein. (203 aa)
	ENSCJAP00000067540	TAFII28 domain-containing protein. (203 aa)
	TCEA1	Transcription elongation factor A1. (311 aa)
	GTF2H5	General transcription factor IIH subunit 5. (75 aa)
	TAF7	Transcription initiation factor TFIID subunit 7. (349 aa)
	TAF12	Transcription initiation factor TFIID subunit 12. (161 aa)
	TAF9B	TATA-box binding protein associated factor 9b. (312 aa)
	TAF5	Transcription initiation factor TFIID subunit 5. (800 aa)
	GTF2A2	TFIIA_gamma_N domain-containing protein. (59 aa)
	TAF10	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (217 aa)
	ERCC2	TFIIH basal transcription factor complex helicase XPD subunit isoform 1. (760 aa)
	GTF2E2	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (297 aa)
	TAF2	TATA-box binding protein associated factor 2. (1323 aa)
	TAF7L	TATA-box binding protein associated factor 7 like. (496 aa)
	TAF8	Transcription initiation factor TFIID subunit 8. (310 aa)
	TAF13	Transcription initiation factor TFIID subunit 13. (124 aa)
	GTF2H4	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
	GTF2H3	General transcription factor IIH subunit 3 isoform a. (309 aa)
	TBP	TATA-box binding protein. (332 aa)
	TAF3	TATA-box binding protein associated factor 3. (931 aa)
	TAF4B	TATA-box binding protein associated factor 4b. (868 aa)
	TAF6	TATA-box binding protein associated factor 6. (713 aa)
	TAF11	Transcription initiation factor TFIID subunit 11 isoform 1. (211 aa)

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCJAP00000053805	ENSCJAP00000067540	ENSCJAP00000053805	ENSCJAP00000067540	Uncharacterized protein.	TAFII28 domain-containing protein.	0.829
ENSCJAP00000053805	ENSCJAP00000070800	ENSCJAP00000053805	ENSCJAP00000070800	Uncharacterized protein.	TAFII28 domain-containing protein.	0.829
ENSCJAP00000053805	ENSCJAP00000071842	ENSCJAP00000053805	ENSCJAP00000071842	Uncharacterized protein.	TAFII28 domain-containing protein.	0.829
ENSCJAP00000053805	ENSCJAP00000075599	ENSCJAP00000053805	ENSCJAP00000075599	Uncharacterized protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.797
ENSCJAP00000053805	ENSCJAP00000075765	ENSCJAP00000053805	ENSCJAP00000075765	Uncharacterized protein.	Uncharacterized protein.	0.919
ENSCJAP00000053805	ERCC2	ENSCJAP00000053805	ENSCJAP00000023359	Uncharacterized protein.	TFIIH basal transcription factor complex helicase XPD subunit isoform 1.	0.795
ENSCJAP00000053805	GTF2A2	ENSCJAP00000053805	ENSCJAP00000028070	Uncharacterized protein.	TFIIA_gamma_N domain-containing protein.	0.797
ENSCJAP00000053805	GTF2E1	ENSCJAP00000053805	ENSCJAP00000072936	Uncharacterized protein.	General transcription factor IIE subunit 1.	0.818
ENSCJAP00000053805	GTF2E2	ENSCJAP00000053805	ENSCJAP00000022714	Uncharacterized protein.	Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.	0.878
ENSCJAP00000053805	GTF2F1	ENSCJAP00000053805	ENSCJAP00000075641	Uncharacterized protein.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.820
ENSCJAP00000053805	GTF2H3	ENSCJAP00000053805	ENSCJAP00000038085	Uncharacterized protein.	General transcription factor IIH subunit 3 isoform a.	0.794
ENSCJAP00000053805	GTF2H4	ENSCJAP00000053805	ENSCJAP00000036909	Uncharacterized protein.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.768
ENSCJAP00000053805	GTF2H5	ENSCJAP00000053805	ENSCJAP00000064596	Uncharacterized protein.	General transcription factor IIH subunit 5.	0.709
ENSCJAP00000053805	TAF1	ENSCJAP00000053805	ENSCJAP00000074458	Uncharacterized protein.	Transcription initiation factor TFIID subunit.	0.960
ENSCJAP00000053805	TAF10	ENSCJAP00000053805	ENSCJAP00000025656	Uncharacterized protein.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.963
ENSCJAP00000053805	TAF11	ENSCJAP00000053805	ENSCJAP00000046844	Uncharacterized protein.	Transcription initiation factor TFIID subunit 11 isoform 1.	0.829
ENSCJAP00000053805	TAF12	ENSCJAP00000053805	ENSCJAP00000056001	Uncharacterized protein.	Transcription initiation factor TFIID subunit 12.	0.963
ENSCJAP00000053805	TAF2	ENSCJAP00000053805	ENSCJAP00000010278	Uncharacterized protein.	TATA-box binding protein associated factor 2.	0.961
ENSCJAP00000053805	TAF3	ENSCJAP00000053805	ENSCJAP00000038390	Uncharacterized protein.	TATA-box binding protein associated factor 3.	0.942
ENSCJAP00000053805	TAF4	ENSCJAP00000053805	ENSCJAP00000078348	Uncharacterized protein.	TATA-box binding protein associated factor 4.	0.928