29 items (Callithrix jacchus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NDUFA10	NADH:ubiquinone oxidoreductase subunit A10. (272 aa)
	NDUFV1	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. (464 aa)
	NDUFS2	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial isoform 1; Belongs to the complex I 49 kDa subunit family. (463 aa)
	NDUFB6	Uncharacterized protein. (132 aa)
	NDUFA7	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7. (113 aa)
	NDUFB2	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial. (105 aa)
	NDUFS8	Uncharacterized protein. (210 aa)
	NDUFB8	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (186 aa)
	NDUFS3	NADH:ubiquinone oxidoreductase core subunit S3; Belongs to the complex I 30 kDa subunit family. (262 aa)
	NDUFAF1	Complex I intermediate-associated protein 30, mitochondrial. (327 aa)
	NDUFB9	NADH:ubiquinone oxidoreductase subunit B9; Belongs to the complex I LYR family. (185 aa)
	ENSCJAP00000053009	Uncharacterized protein. (94 aa)
	NDUFV2	NADH:ubiquinone oxidoreductase core subunit V2. (249 aa)
	NDUFS7	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family. (142 aa)
	ENSCJAP00000058861	Uncharacterized protein. (134 aa)
	ENSCJAP00000060559	Uncharacterized protein. (92 aa)
	COQ9	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration. (360 aa)
	NDUFS1	NADH:ubiquinone oxidoreductase core subunit S1; Belongs to the complex I 75 kDa subunit family. (741 aa)
	NDUFS6	zf-CHCC domain-containing protein. (252 aa)
	NDUFA8	NADH:ubiquinone oxidoreductase subunit A8. (244 aa)
	ENSCJAP00000069839	Uncharacterized protein. (143 aa)
	ENSCJAP00000072042	Uncharacterized protein. (119 aa)
	ENSCJAP00000072097	Uncharacterized protein. (208 aa)
	ENSCJAP00000072771	Uncharacterized protein. (207 aa)
	ENSCJAP00000074276	Uncharacterized protein. (129 aa)
	ENSCJAP00000075595	Uncharacterized protein. (77 aa)
	ENSCJAP00000077594	Uncharacterized protein. (74 aa)
	ENSCJAP00000078257	Uncharacterized protein. (91 aa)
	NDUFC2	NADH dehydrogenase [ubiquinone] 1 subunit C2; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (126 aa)

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
COQ9	NDUFB9	ENSCJAP00000066805	ENSCJAP00000042004	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.	NADH:ubiquinone oxidoreductase subunit B9; Belongs to the complex I LYR family.	0.442
COQ9	NDUFS1	ENSCJAP00000066805	ENSCJAP00000067831	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.	NADH:ubiquinone oxidoreductase core subunit S1; Belongs to the complex I 75 kDa subunit family.	0.433
COQ9	NDUFS2	ENSCJAP00000066805	ENSCJAP00000009326	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.	NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial isoform 1; Belongs to the complex I 49 kDa subunit family.	0.500
COQ9	NDUFV1	ENSCJAP00000066805	ENSCJAP00000001492	Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.602
ENSCJAP00000053009	ENSCJAP00000058861	ENSCJAP00000053009	ENSCJAP00000058861	Uncharacterized protein.	Uncharacterized protein.	0.841
ENSCJAP00000053009	ENSCJAP00000072097	ENSCJAP00000053009	ENSCJAP00000072097	Uncharacterized protein.	Uncharacterized protein.	0.811
ENSCJAP00000053009	ENSCJAP00000072771	ENSCJAP00000053009	ENSCJAP00000072771	Uncharacterized protein.	Uncharacterized protein.	0.851
ENSCJAP00000053009	ENSCJAP00000074276	ENSCJAP00000053009	ENSCJAP00000074276	Uncharacterized protein.	Uncharacterized protein.	0.821
ENSCJAP00000053009	ENSCJAP00000075595	ENSCJAP00000053009	ENSCJAP00000075595	Uncharacterized protein.	Uncharacterized protein.	0.870
ENSCJAP00000053009	ENSCJAP00000077594	ENSCJAP00000053009	ENSCJAP00000077594	Uncharacterized protein.	Uncharacterized protein.	0.856
ENSCJAP00000053009	ENSCJAP00000078257	ENSCJAP00000053009	ENSCJAP00000078257	Uncharacterized protein.	Uncharacterized protein.	0.856
ENSCJAP00000053009	NDUFA10	ENSCJAP00000053009	ENSCJAP00000057635	Uncharacterized protein.	NADH:ubiquinone oxidoreductase subunit A10.	0.896
ENSCJAP00000053009	NDUFA7	ENSCJAP00000053009	ENSCJAP00000019746	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7.	0.841
ENSCJAP00000053009	NDUFA8	ENSCJAP00000053009	ENSCJAP00000069451	Uncharacterized protein.	NADH:ubiquinone oxidoreductase subunit A8.	0.947
ENSCJAP00000053009	NDUFAF1	ENSCJAP00000053009	ENSCJAP00000038602	Uncharacterized protein.	Complex I intermediate-associated protein 30, mitochondrial.	0.505
ENSCJAP00000053009	NDUFB2	ENSCJAP00000053009	ENSCJAP00000024878	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial.	0.745
ENSCJAP00000053009	NDUFB8	ENSCJAP00000053009	ENSCJAP00000031928	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.945
ENSCJAP00000053009	NDUFB9	ENSCJAP00000053009	ENSCJAP00000042004	Uncharacterized protein.	NADH:ubiquinone oxidoreductase subunit B9; Belongs to the complex I LYR family.	0.933
ENSCJAP00000053009	NDUFC2	ENSCJAP00000053009	ENSCJAP00000078617	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] 1 subunit C2; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.856
ENSCJAP00000053009	NDUFS1	ENSCJAP00000053009	ENSCJAP00000067831	Uncharacterized protein.	NADH:ubiquinone oxidoreductase core subunit S1; Belongs to the complex I 75 kDa subunit family.	0.882