STRINGSTRING
SHOX2 SHOX2 SMYD1 SMYD1 BHLHE41 BHLHE41 FBXO22 FBXO22 MYF5 MYF5 MAMSTR MAMSTR MYOD1 MYOD1 MYOG MYOG BHLHA15 BHLHA15 XBP1 XBP1 MYF6 MYF6 RBM38 RBM38 NIBAN2 NIBAN2 TBX1 TBX1 LMOD3 LMOD3 DMPK DMPK NOTCH1 NOTCH1 HDAC4 HDAC4 MMP14 MMP14 PPAPDC3 PPAPDC3 CCN3 CCN3 MYOCD MYOCD CYP26B1 CYP26B1 F7HRG7_CALJA F7HRG7_CALJA MTOR MTOR ACTN3 ACTN3 RBM24 RBM24 ENSCJAP00000071395 ENSCJAP00000071395 HDAC9 HDAC9 MAPK14 MAPK14 ENSCJAP00000078861 ENSCJAP00000078861 ATP11A ATP11A NKX2-5 NKX2-5 CAV3 CAV3 ENSCJAP00000074699 ENSCJAP00000074699 PIEZO1 PIEZO1 BCL2 BCL2 MAML1 MAML1 HDAC5 HDAC5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SHOX2Short stature homeobox 2. (319 aa)
SMYD1SET and MYND domain-containing protein 1. (490 aa)
BHLHE41Class E basic helix-loop-helix protein 41. (476 aa)
FBXO22F-box only protein 22 isoform a. (404 aa)
MYF5Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (255 aa)
MAMSTRMEF2 activating motif and SAP domain containing transcriptional regulator. (414 aa)
MYOD1Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (348 aa)
MYOGMyogenin. (249 aa)
BHLHA15Basic helix-loop-helix family member a15. (189 aa)
XBP1BZIP domain-containing protein. (371 aa)
MYF6Myogenic factor 6. (242 aa)
RBM38RNA-binding protein 38 isoform a. (239 aa)
NIBAN2Niban-like protein 1 isoform 1. (746 aa)
TBX1T-box transcription factor 1. (506 aa)
LMOD3Leiomodin 3. (562 aa)
DMPKDM1 protein kinase. (630 aa)
NOTCH1Notch receptor 1. (2551 aa)
HDAC4Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1035 aa)
MMP14Matrix metalloproteinase-14 preproprotein. (582 aa)
PPAPDC3Putative lipid phosphate phosphatase PPAPDC3. (271 aa)
CCN3Cellular communication network factor 3. (357 aa)
MYOCDMyocardin isoform 1. (982 aa)
CYP26B1Cytochrome P450 family 26 subfamily B member 1; Belongs to the cytochrome P450 family. (512 aa)
F7HRG7_CALJATripartite motif containing 72. (477 aa)
MTORSerine/threonine-protein kinase mTOR; Belongs to the PI3/PI4-kinase family. (2549 aa)
ACTN3Actinin alpha 3 (gene/pseudogene). (942 aa)
RBM24RNA-binding protein 24 isoform 1. (236 aa)
ENSCJAP00000071395BZIP domain-containing protein. (345 aa)
HDAC9Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1096 aa)
MAPK14Mitogen-activated protein kinase. (360 aa)
ENSCJAP00000078861RRM domain-containing protein. (241 aa)
ATP11APhospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1173 aa)
NKX2-5NK2 homeobox 5. (324 aa)
CAV3Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (148 aa)
ENSCJAP00000074699RRM domain-containing protein. (240 aa)
PIEZO1Piezo-type mechanosensitive ion channel component. (2606 aa)
BCL2BCL2 apoptosis regulator. (240 aa)
MAML1Mastermind like transcriptional coactivator 1. (1013 aa)
HDAC5Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1124 aa)
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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