STRINGSTRING
GTF2E2 GTF2E2 TBPL1 TBPL1 TAF8 TAF8 TAF7L TAF7L TAF2 TAF2 SNAPC5 SNAPC5 PRRX1 PRRX1 C11orf88 C11orf88 SNAPC4 SNAPC4 TAF10 TAF10 GTF2A2 GTF2A2 GTF2A1 GTF2A1 TAF5 TAF5 TBPL2 TBPL2 GTF2F2 GTF2F2 GTF2H4 GTF2H4 GTF2H3 GTF2H3 TBP TBP TAF3 TAF3 TAF4B TAF4B TAF6 TAF6 TAF6L TAF6L TAF7 TAF7 DRAP1 DRAP1 DR1 DR1 GTF2E1 GTF2E1 TAF1 TAF1 ENSCJAP00000075599 ENSCJAP00000075599 GTF2F1 GTF2F1 ENSCJAP00000075765 ENSCJAP00000075765 SNAPC2 SNAPC2 ENSCJAP00000077195 ENSCJAP00000077195
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GTF2E2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (297 aa)
TBPL1TATA box-binding protein-like protein 1. (186 aa)
TAF8Transcription initiation factor TFIID subunit 8. (310 aa)
TAF7LTATA-box binding protein associated factor 7 like. (496 aa)
TAF2TATA-box binding protein associated factor 2. (1323 aa)
SNAPC5Small nuclear RNA activating complex polypeptide 5. (98 aa)
PRRX1Paired related homeobox 1. (245 aa)
C11orf88Chromosome 11 open reading frame 88. (170 aa)
SNAPC4Small nuclear RNA activating complex polypeptide 4. (1445 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (217 aa)
GTF2A2TFIIA_gamma_N domain-containing protein. (59 aa)
GTF2A1Transcription initiation factor IIA subunit 1 isoform 1. (376 aa)
TAF5Transcription initiation factor TFIID subunit 5. (800 aa)
TBPL2TATA-box binding protein like 2. (371 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
GTF2H3General transcription factor IIH subunit 3 isoform a. (309 aa)
TBPTATA-box binding protein. (332 aa)
TAF3TATA-box binding protein associated factor 3. (931 aa)
TAF4BTATA-box binding protein associated factor 4b. (868 aa)
TAF6TATA-box binding protein associated factor 6. (713 aa)
TAF6LTAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L. (622 aa)
TAF7Transcription initiation factor TFIID subunit 7. (349 aa)
DRAP1DR1 associated protein 1. (212 aa)
DR1Protein Dr1. (176 aa)
GTF2E1General transcription factor IIE subunit 1. (464 aa)
TAF1Transcription initiation factor TFIID subunit. (1927 aa)
ENSCJAP00000075599Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (115 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (539 aa)
ENSCJAP00000075765Uncharacterized protein. (260 aa)
SNAPC2Small nuclear RNA activating complex polypeptide 2. (342 aa)
ENSCJAP00000077195TFIIF_beta domain-containing protein. (125 aa)
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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