(13 nodes) Telencephalon regionalization network (Callithrix jacchus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ADGRG1	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (728 aa)
	SIX3	SIX homeobox 3. (331 aa)
	LHX2	LIM/homeobox protein Lhx2. (406 aa)
	EMX2	Homeobox protein EMX2 isoform 1. (252 aa)
	TRA2B	Transformer-2 protein homolog beta isoform 1. (288 aa)
	GSX2	GS homeobox 2. (305 aa)
	SHH	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development. (477 aa)
	EOMES	Eomesodermin. (706 aa)
	EMX1	Empty spiracles homeobox 1. (290 aa)
	DMRTA2	DMRT like family A2. (536 aa)
	PAX6	Paired box 6. (472 aa)
	BMP4	Bone morphogenetic protein 4 preproprotein. (408 aa)
	BMP2	Bone morphogenetic protein 2. (401 aa)

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMP2	BMP4	ENSCJAP00000073814	ENSCJAP00000070142	Bone morphogenetic protein 2.	Bone morphogenetic protein 4 preproprotein.	0.942
BMP2	SHH	ENSCJAP00000073814	ENSCJAP00000037954	Bone morphogenetic protein 2.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.438
BMP4	BMP2	ENSCJAP00000070142	ENSCJAP00000073814	Bone morphogenetic protein 4 preproprotein.	Bone morphogenetic protein 2.	0.942
BMP4	EOMES	ENSCJAP00000070142	ENSCJAP00000052017	Bone morphogenetic protein 4 preproprotein.	Eomesodermin.	0.502
BMP4	PAX6	ENSCJAP00000070142	ENSCJAP00000057969	Bone morphogenetic protein 4 preproprotein.	Paired box 6.	0.593
BMP4	SHH	ENSCJAP00000070142	ENSCJAP00000037954	Bone morphogenetic protein 4 preproprotein.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.736
DMRTA2	EMX2	ENSCJAP00000057733	ENSCJAP00000058946	DMRT like family A2.	Homeobox protein EMX2 isoform 1.	0.623
DMRTA2	GSX2	ENSCJAP00000057733	ENSCJAP00000034207	DMRT like family A2.	GS homeobox 2.	0.434
EMX1	EOMES	ENSCJAP00000057341	ENSCJAP00000052017	Empty spiracles homeobox 1.	Eomesodermin.	0.477
EMX1	GSX2	ENSCJAP00000057341	ENSCJAP00000034207	Empty spiracles homeobox 1.	GS homeobox 2.	0.411
EMX1	PAX6	ENSCJAP00000057341	ENSCJAP00000057969	Empty spiracles homeobox 1.	Paired box 6.	0.495
EMX1	SHH	ENSCJAP00000057341	ENSCJAP00000037954	Empty spiracles homeobox 1.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.499
EMX2	DMRTA2	ENSCJAP00000058946	ENSCJAP00000057733	Homeobox protein EMX2 isoform 1.	DMRT like family A2.	0.623
EMX2	PAX6	ENSCJAP00000058946	ENSCJAP00000057969	Homeobox protein EMX2 isoform 1.	Paired box 6.	0.449
EMX2	SHH	ENSCJAP00000058946	ENSCJAP00000037954	Homeobox protein EMX2 isoform 1.	Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.	0.549
EMX2	SIX3	ENSCJAP00000058946	ENSCJAP00000001262	Homeobox protein EMX2 isoform 1.	SIX homeobox 3.	0.415
EOMES	BMP4	ENSCJAP00000052017	ENSCJAP00000070142	Eomesodermin.	Bone morphogenetic protein 4 preproprotein.	0.502
EOMES	EMX1	ENSCJAP00000052017	ENSCJAP00000057341	Eomesodermin.	Empty spiracles homeobox 1.	0.477
EOMES	PAX6	ENSCJAP00000052017	ENSCJAP00000057969	Eomesodermin.	Paired box 6.	0.601
GSX2	DMRTA2	ENSCJAP00000034207	ENSCJAP00000057733	GS homeobox 2.	DMRT like family A2.	0.434