STRINGSTRING
NOTCH1 NOTCH1 TRIM16 TRIM16 SULT2B1 SULT2B1 PTCH2 PTCH2 OVOL2 OVOL2 MACROH2A1 MACROH2A1 CYP27B1 CYP27B1 MED1 MED1 KDF1 KDF1 ETV4 ETV4 VDR VDR PLAAT4 PLAAT4 IL20 IL20 ATOH1 ATOH1 SFRP4 SFRP4 PTCH1 PTCH1 SFN SFN ZBED2 ZBED2 BMP4 BMP4 NUMA1 NUMA1 NCOA3 NCOA3 ENSCJAP00000074167 ENSCJAP00000074167
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NOTCH1Notch receptor 1. (2551 aa)
TRIM16B30.2/SPRY domain-containing protein. (565 aa)
SULT2B1Sulfotransferase; Belongs to the sulfotransferase 1 family. (353 aa)
PTCH2Protein patched homolog 2 isoform 1. (1203 aa)
OVOL2Transcription factor Ovo-like 2. (275 aa)
MACROH2A1Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
CYP27B1Cytochrome P450 family 27 subfamily B member 1; Belongs to the cytochrome P450 family. (509 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1580 aa)
KDF1Keratinocyte differentiation factor 1. (398 aa)
ETV4ETS translocation variant 4 isoform 1. (484 aa)
VDRVitamin D receptor. (427 aa)
PLAAT4Phospholipase A and acyltransferase 4. (164 aa)
IL20Interleukin 20. (176 aa)
ATOH1Atonal bHLH transcription factor 1. (354 aa)
SFRP4Secreted frizzled related protein 4. (346 aa)
PTCH1Protein patched homolog 1 isoform L. (1449 aa)
SFNStratifin; Belongs to the 14-3-3 family. (248 aa)
ZBED2Zinc finger BED-type containing 2. (218 aa)
BMP4Bone morphogenetic protein 4 preproprotein. (408 aa)
NUMA1Nuclear mitotic apparatus protein 1. (2127 aa)
NCOA3Nuclear receptor coactivator. (1485 aa)
ENSCJAP00000074167Nucleoside diphosphate kinase. (149 aa)
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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