(9 nodes) STAT family protein binding network (Callithrix jacchus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSCJAP00000039892	Heat shock transcription factor 1. (557 aa)
	LOC100410101	Protein FAM220A. (258 aa)
	ENSCJAP00000065716	Histone H2B; Belongs to the histone H2B family. (126 aa)
	PTPN2	Tyrosine-protein phosphatase non-receptor type. (429 aa)
	FAM162A	Family with sequence similarity 162 member A. (155 aa)
	EP300	E1A binding protein p300. (2426 aa)
	DTX3L	Deltex E3 ubiquitin ligase 3L. (745 aa)
	PARP9	Poly(ADP-ribose) polymerase family member 9. (835 aa)
	PTPRT	Protein tyrosine phosphatase receptor type T. (1414 aa)

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DTX3L	FAM162A	ENSCJAP00000014765	ENSCJAP00000049712	Deltex E3 ubiquitin ligase 3L.	Family with sequence similarity 162 member A.	0.805
DTX3L	PARP9	ENSCJAP00000014765	ENSCJAP00000014814	Deltex E3 ubiquitin ligase 3L.	Poly(ADP-ribose) polymerase family member 9.	0.990
ENSCJAP00000039892	EP300	ENSCJAP00000039892	ENSCJAP00000008779	Heat shock transcription factor 1.	E1A binding protein p300.	0.458
EP300	ENSCJAP00000039892	ENSCJAP00000008779	ENSCJAP00000039892	E1A binding protein p300.	Heat shock transcription factor 1.	0.458
FAM162A	DTX3L	ENSCJAP00000049712	ENSCJAP00000014765	Family with sequence similarity 162 member A.	Deltex E3 ubiquitin ligase 3L.	0.805
PARP9	DTX3L	ENSCJAP00000014814	ENSCJAP00000014765	Poly(ADP-ribose) polymerase family member 9.	Deltex E3 ubiquitin ligase 3L.	0.990