STRINGSTRING
ENSCJAP00000073330 ENSCJAP00000073330 HUWE1 HUWE1 PRKN PRKN ENSCJAP00000068982 ENSCJAP00000068982 ENSCJAP00000066433 ENSCJAP00000066433 TOMM7 TOMM7 LOC100412918 LOC100412918 MFN2 MFN2 OPTN OPTN PINK1 PINK1 HDAC6 HDAC6 CDC37 CDC37
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSCJAP00000073330Hist_deacetyl domain-containing protein. (262 aa)
HUWE1HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1. (4458 aa)
PRKNE3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. (476 aa)
ENSCJAP00000068982Uncharacterized protein. (95 aa)
ENSCJAP00000066433Uncharacterized protein. (59 aa)
TOMM7Mitochondrial import receptor subunit TOM7 homolog. (55 aa)
LOC100412918Uncharacterized protein. (55 aa)
MFN2Mitofusin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (757 aa)
OPTNOptineurin. (578 aa)
PINK1Serine/threonine-protein kinase PINK1, mitochondrial. (581 aa)
HDAC6Histone deacetylase 6. (1254 aa)
CDC37Cell division cycle 37. (441 aa)
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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