(22 nodes) Transforming growth factor-beta-related network (Callithrix jacchus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GDF7	Growth differentiation factor 7. (449 aa)
	GDF11	Growth differentiation factor 11. (408 aa)
	BMP7	Bone morphogenetic protein 7. (430 aa)
	BMP4	Bone morphogenetic protein 4 preproprotein. (408 aa)
	BMP3	Bone morphogenetic protein 3; Belongs to the TGF-beta family. (472 aa)
	GDF15	Growth differentiation factor 15. (306 aa)
	INHBA	Inhibin subunit beta A. (426 aa)
	INHBB	Inhibin subunit beta B. (407 aa)
	INHBC	Inhibin subunit beta C. (351 aa)
	INHBE	Inhibin subunit beta E. (350 aa)
	BMP8A	Bone morphogenetic protein 8B preproprotein. (402 aa)
	BMP6	Bone morphogenetic protein 6. (504 aa)
	TGFB1	Transforming growth factor beta; Belongs to the TGF-beta family. (390 aa)
	BMP10	Bone morphogenetic protein 10. (424 aa)
	GDF5	Growth differentiation factor 5. (501 aa)
	TGFB2	Transforming growth factor beta; Belongs to the TGF-beta family. (442 aa)
	GDF2	Growth differentiation factor 2. (426 aa)
	NODAL	Nodal growth differentiation factor. (346 aa)
	GDF9	Growth differentiation factor 9. (455 aa)
	GDF10	Bone morphogenetic protein 3; Belongs to the TGF-beta family. (478 aa)
	GDF3	Growth differentiation factor 3. (364 aa)
	MSTN	Myostatin. (380 aa)

Your Current Organism:

Callithrix jacchus

NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMP10	BMP4	ENSCJAP00000035446	ENSCJAP00000070142	Bone morphogenetic protein 10.	Bone morphogenetic protein 4 preproprotein.	0.454
BMP10	BMP6	ENSCJAP00000035446	ENSCJAP00000039699	Bone morphogenetic protein 10.	Bone morphogenetic protein 6.	0.431
BMP10	BMP7	ENSCJAP00000035446	ENSCJAP00000070399	Bone morphogenetic protein 10.	Bone morphogenetic protein 7.	0.413
BMP10	GDF15	ENSCJAP00000035446	ENSCJAP00000065294	Bone morphogenetic protein 10.	Growth differentiation factor 15.	0.767
BMP10	GDF2	ENSCJAP00000035446	ENSCJAP00000025123	Bone morphogenetic protein 10.	Growth differentiation factor 2.	0.705
BMP4	BMP10	ENSCJAP00000070142	ENSCJAP00000035446	Bone morphogenetic protein 4 preproprotein.	Bone morphogenetic protein 10.	0.454
BMP4	BMP6	ENSCJAP00000070142	ENSCJAP00000039699	Bone morphogenetic protein 4 preproprotein.	Bone morphogenetic protein 6.	0.966
BMP4	BMP7	ENSCJAP00000070142	ENSCJAP00000070399	Bone morphogenetic protein 4 preproprotein.	Bone morphogenetic protein 7.	0.824
BMP4	GDF15	ENSCJAP00000070142	ENSCJAP00000065294	Bone morphogenetic protein 4 preproprotein.	Growth differentiation factor 15.	0.583
BMP4	GDF5	ENSCJAP00000070142	ENSCJAP00000032881	Bone morphogenetic protein 4 preproprotein.	Growth differentiation factor 5.	0.500
BMP6	BMP10	ENSCJAP00000039699	ENSCJAP00000035446	Bone morphogenetic protein 6.	Bone morphogenetic protein 10.	0.431
BMP6	BMP4	ENSCJAP00000039699	ENSCJAP00000070142	Bone morphogenetic protein 6.	Bone morphogenetic protein 4 preproprotein.	0.966
BMP6	GDF5	ENSCJAP00000039699	ENSCJAP00000032881	Bone morphogenetic protein 6.	Growth differentiation factor 5.	0.406
BMP6	GDF7	ENSCJAP00000039699	ENSCJAP00000013995	Bone morphogenetic protein 6.	Growth differentiation factor 7.	0.607
BMP7	BMP10	ENSCJAP00000070399	ENSCJAP00000035446	Bone morphogenetic protein 7.	Bone morphogenetic protein 10.	0.413
BMP7	BMP4	ENSCJAP00000070399	ENSCJAP00000070142	Bone morphogenetic protein 7.	Bone morphogenetic protein 4 preproprotein.	0.824
BMP7	GDF5	ENSCJAP00000070399	ENSCJAP00000032881	Bone morphogenetic protein 7.	Growth differentiation factor 5.	0.475
BMP7	GDF7	ENSCJAP00000070399	ENSCJAP00000013995	Bone morphogenetic protein 7.	Growth differentiation factor 7.	0.925
BMP8A	INHBA	ENSCJAP00000043157	ENSCJAP00000061382	Bone morphogenetic protein 8B preproprotein.	Inhibin subunit beta A.	0.414
BMP8A	INHBB	ENSCJAP00000043157	ENSCJAP00000059558	Bone morphogenetic protein 8B preproprotein.	Inhibin subunit beta B.	0.429