STRINGSTRING
TBP TBP GTF2H3 GTF2H3 GTF2H4 GTF2H4 TAF9B TAF9B GTF2F2 GTF2F2 MNAT1 MNAT1 POLR2G POLR2G TAF5 TAF5 GTF2A1 GTF2A1 GTF2H2 GTF2H2 POLR2J POLR2J F7I7J6_CALJA F7I7J6_CALJA TAF15 TAF15 TAF10 TAF10 ERCC2 ERCC2 POLR2C POLR2C GTF2A1L GTF2A1L C11orf88 C11orf88 POLR2I POLR2I POLR2E POLR2E GTF2B GTF2B TAF2 TAF2 POLR2H POLR2H TAF7L TAF7L POLR2B POLR2B TBPL1 TBPL1 TAF13 TAF13 POLR2A POLR2A GTF2A2 GTF2A2 CDK7 CDK7 ENSCJAP00000071842 ENSCJAP00000071842 GTF2E1 GTF2E1 POLR2L POLR2L ENSCJAP00000073389 ENSCJAP00000073389 ENSCJAP00000064715 ENSCJAP00000064715 POLR2F POLR2F LOC108590593 LOC108590593 POLR2D POLR2D ENSCJAP00000067540 ENSCJAP00000067540 ENSCJAP00000068191 ENSCJAP00000068191 ENSCJAP00000070800 ENSCJAP00000070800 TAF4 TAF4 ERCC3 ERCC3 ENSCJAP00000077195 ENSCJAP00000077195 ENSCJAP00000075765 ENSCJAP00000075765 GTF2F1 GTF2F1 ENSCJAP00000075599 ENSCJAP00000075599 TAF1 TAF1 ENSCJAP00000073788 ENSCJAP00000073788 POLR2L-2 POLR2L-2 TAF7 TAF7 CCNH CCNH ENSCJAP00000056126 ENSCJAP00000056126 TAF12 TAF12 ENSCJAP00000053805 ENSCJAP00000053805 TAF11 TAF11 TAF6 TAF6 GTF2H1 GTF2H1 F7HQK1_CALJA F7HQK1_CALJA TAF4B TAF4B GTF2H5 GTF2H5 TAF3 TAF3 GTF2E2 GTF2E2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TBPTATA-box binding protein. (332 aa)
GTF2H3General transcription factor IIH subunit 3 isoform a. (309 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
TAF9BTATA-box binding protein associated factor 9b. (312 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
POLR2GUncharacterized protein. (176 aa)
TAF5Transcription initiation factor TFIID subunit 5. (800 aa)
GTF2A1Transcription initiation factor IIA subunit 1 isoform 1. (376 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
POLR2JDNA-directed RNA polymerase II subunit RPB11-a. (117 aa)
F7I7J6_CALJAUncharacterized protein. (263 aa)
TAF15TATA-box binding protein associated factor 15. (592 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (217 aa)
ERCC2TFIIH basal transcription factor complex helicase XPD subunit isoform 1. (760 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
GTF2A1LUncharacterized protein. (478 aa)
C11orf88Chromosome 11 open reading frame 88. (170 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
POLR2ERNA polymerase II subunit E. (140 aa)
GTF2BTranscription initiation factor IIB. (316 aa)
TAF2TATA-box binding protein associated factor 2. (1323 aa)
POLR2HRNA polymerase II subunit H. (195 aa)
TAF7LTATA-box binding protein associated factor 7 like. (496 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
TBPL1TATA box-binding protein-like protein 1. (186 aa)
TAF13Transcription initiation factor TFIID subunit 13. (124 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
GTF2A2TFIIA_gamma_N domain-containing protein. (59 aa)
CDK7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
ENSCJAP00000071842TAFII28 domain-containing protein. (203 aa)
GTF2E1General transcription factor IIE subunit 1. (464 aa)
POLR2LUncharacterized protein. (67 aa)
ENSCJAP00000073389Uncharacterized protein. (194 aa)
ENSCJAP00000064715Uncharacterized protein. (71 aa)
POLR2FUncharacterized protein. (149 aa)
LOC108590593DNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
POLR2DDNA-directed RNA polymerase II subunit RPB4. (142 aa)
ENSCJAP00000067540TAFII28 domain-containing protein. (203 aa)
ENSCJAP00000068191Uncharacterized protein. (182 aa)
ENSCJAP00000070800TAFII28 domain-containing protein. (203 aa)
TAF4TATA-box binding protein associated factor 4. (1085 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (807 aa)
ENSCJAP00000077195TFIIF_beta domain-containing protein. (125 aa)
ENSCJAP00000075765Uncharacterized protein. (260 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (539 aa)
ENSCJAP00000075599Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (115 aa)
TAF1Transcription initiation factor TFIID subunit. (1927 aa)
ENSCJAP00000073788RRM domain-containing protein. (610 aa)
POLR2L-2DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
TAF7Transcription initiation factor TFIID subunit 7. (349 aa)
CCNHCyclin H; Belongs to the cyclin family. (325 aa)
ENSCJAP00000056126Uncharacterized protein. (72 aa)
TAF12Transcription initiation factor TFIID subunit 12. (161 aa)
ENSCJAP00000053805Uncharacterized protein. (124 aa)
TAF11Transcription initiation factor TFIID subunit 11 isoform 1. (211 aa)
TAF6TATA-box binding protein associated factor 6. (713 aa)
GTF2H1General transcription factor IIH subunit 1. (548 aa)
F7HQK1_CALJARPOL4c domain-containing protein. (142 aa)
TAF4BTATA-box binding protein associated factor 4b. (868 aa)
GTF2H5General transcription factor IIH subunit 5. (75 aa)
TAF3TATA-box binding protein associated factor 3. (931 aa)
GTF2E2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (297 aa)
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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