STRINGSTRING
HGF HGF SLC12A1 SLC12A1 TTR TTR SIX2 SIX2 POU5F1 POU5F1 BMP7 BMP7 BMP4 BMP4 PODXL PODXL WNT4 WNT4 PAX2 PAX2 SIX1 SIX1 EYA1 EYA1 AQP2 AQP2 POU5F1-2 POU5F1-2 NANOG NANOG CDH11 CDH11 ALB ALB AFP AFP NPHS2 NPHS2 GDNF GDNF WT1 WT1 CLCN5 CLCN5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HGFHepatocyte growth factor; Belongs to the peptidase S1 family. (813 aa)
SLC12A1Solute carrier family 12 member 1. (1131 aa)
TTRTransthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. (144 aa)
SIX2Homeobox protein SIX2. (291 aa)
POU5F1POU-specific domain-containing protein. (484 aa)
BMP7Bone morphogenetic protein 7. (430 aa)
BMP4Bone morphogenetic protein 4 preproprotein. (408 aa)
PODXLPodocalyxin; Involved in the regulation of both adhesion and cell morphology and cancer progression. Function as an anti-adhesive molecule that maintains an open filtration pathway between neighboring foot processes in the podocyte by charge repulsion. Belongs to the podocalyxin family. (540 aa)
WNT4Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (351 aa)
PAX2Paired box 2. (448 aa)
SIX1Homeobox protein SIX1. (284 aa)
EYA1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (643 aa)
AQP2Aquaporin 2; Belongs to the MIP/aquaporin (TC 1.A.8) family. (271 aa)
POU5F1-2Uncharacterized protein. (146 aa)
NANOGHomeobox domain-containing protein. (305 aa)
CDH11Cadherin-11 preproprotein; Cadherins are calcium-dependent cell adhesion proteins. (796 aa)
ALBAlbumin. (608 aa)
AFPAlpha fetoprotein. (609 aa)
NPHS2NPHS2 stomatin family member, podocin. (412 aa)
GDNFGlial cell derived neurotrophic factor. (228 aa)
WT1WT1 transcription factor. (522 aa)
CLCN5Chloride channel protein. (816 aa)
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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