STRINGSTRING
LOC100385831 LOC100385831 VCL VCL CDC25A CDC25A ATM ATM ALB ALB PXDNL PXDNL BRCA2 BRCA2 DROSHA DROSHA LOC100398205 LOC100398205 MDC1 MDC1 LOC100398346 LOC100398346 LOC100394455 LOC100394455 LOC100394573 LOC100394573 LOC100413207 LOC100413207 LOC100414113 LOC100414113 LOC100389168 LOC100389168 ENSCJAP00000063804 ENSCJAP00000063804 LOC100385283 LOC100385283 ENSCJAP00000065541 ENSCJAP00000065541 PXDN PXDN ENSCJAP00000074198 ENSCJAP00000074198 LOC100386265 LOC100386265
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100385831Histone H3; Belongs to the histone H3 family. (135 aa)
VCLVinculin. (1128 aa)
CDC25AM-phase inducer phosphatase 1 isoform a. (524 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3056 aa)
ALBAlbumin. (608 aa)
PXDNLPeroxidasin like. (1457 aa)
BRCA2BRCA2 DNA repair associated. (3409 aa)
DROSHARibonuclease 3 isoform 1. (1374 aa)
LOC100398205Histone H3; Belongs to the histone H3 family. (136 aa)
MDC1Mediator of DNA damage checkpoint 1. (2172 aa)
LOC100398346RAD50 homolog isoform 1 (Predicted). (1312 aa)
LOC100394455Histone H3; Belongs to the histone H3 family. (136 aa)
LOC100394573Histone H3; Belongs to the histone H3 family. (136 aa)
LOC100413207Histone H3; Belongs to the histone H3 family. (135 aa)
LOC100414113Histone H3; Belongs to the histone H3 family. (136 aa)
LOC100389168Histone H3; Belongs to the histone H3 family. (136 aa)
ENSCJAP00000063804Histone H3; Belongs to the histone H3 family. (135 aa)
LOC100385283Histone H3; Belongs to the histone H3 family. (136 aa)
ENSCJAP00000065541Histone H3; Belongs to the histone H3 family. (136 aa)
PXDNUncharacterized protein. (691 aa)
ENSCJAP00000074198Histone H3; Belongs to the histone H3 family. (124 aa)
LOC100386265Histone domain-containing protein. (136 aa)
Your Current Organism:
Callithrix jacchus
NCBI taxonomy Id: 9483
Other names: C. jacchus, Callithrix jacchus jacchus, common marmoset, white ear-tufted marmoset, white-tufted-ear marmoset
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